Cyclopterus lumpus (lumpfish): 117737089
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Entry
117737089 CDS
T09199
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
KO
K04389
tumor necrosis factor ligand superfamily member 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04060
Cytokine-cytokine receptor interaction
clum04068
FoxO signaling pathway
clum04210
Apoptosis
clum04217
Necroptosis
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117737089 (cd40lg)
04068 FoxO signaling pathway
117737089 (cd40lg)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117737089 (cd40lg)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117737089 (cd40lg)
04217 Necroptosis
117737089 (cd40lg)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117737089 (cd40lg)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117737089 (cd40lg)
04052 Cytokines and neuropeptides [BR:
clum04052
]
117737089 (cd40lg)
04090 CD molecules [BR:
clum04090
]
117737089 (cd40lg)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117737089 (cd40lg)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Tumor necrosis fators
117737089 (cd40lg)
CD molecules [BR:
clum04090
]
Proteins
117737089 (cd40lg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
DUF5056
Motif
Other DBs
NCBI-GeneID:
117737089
NCBI-ProteinID:
XP_034398631
Ensembl:
ENSCLMG00005021849
UniProt:
A0A8C3GB91
LinkDB
All DBs
Position
10:complement(16382300..16385463)
Genome browser
AA seq
237 aa
AA seq
DB search
MINTYMTSMAPPPVPPRLSGSHTVLIPAPLPSRSHSKSLIWFLVGVVMLHLFLSIGGFIY
LYHYDRMLSIQLPSGLQGEAALRSSEKQDTSNRALARMVVDQRFRKSDKKSASGYLQWDF
KHSDLRGIGYYRNSWLTIQQPGDYYVNSRVTFSKGDSERPLVSMGKLRTDDKGEEVVMQA
YCNLDSNNGSALIPRLCTATQSVVLTLKKGNQLSVWVQNLSLVNYENEATTFWMYKM
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacacctacatgaccagcatggctccgccgccggtgcctccgcgcctcagcggc
tcccacacagtcctcatcccggctccacttccatcacgaagccacagcaagtccctcatc
tggtttttggttggtgtagtgatgctgcatttattcctgtccatcggaggattcatctat
ctgtaccactatgacagaatgctttcaatccagcttccctcaggactgcagggcgaagcg
gctcttcgctcatctgaaaagcaggacacctccaaccgagccttggcacgcatggtagtt
gatcagcgattccgcaaatcagataagaaatctgcatcgggttatctccagtgggacttc
aagcactcggatcttaggggcatcggctactaccgcaacagttggctgacgatccagcag
cctggtgattactacgtcaactccagggtgaccttctccaagggcgactcggagcgcccc
ctggtcagcatggggaagctgaggacggatgataaaggagaggaagttgtgatgcaggcc
tactgcaacctggacagcaacaacggatctgcgttgatcccccgcctgtgcacggccacg
cagagcgtggtgctcacactgaagaaaggaaaccagctcagtgtctgggtgcaaaacctt
tcactggtgaattacgagaacgaagctacaaccttttggatgtacaagatgtag
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integrated database retrieval system