Cyclopterus lumpus (lumpfish): 117737091
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Entry
117737091 CDS
T09199
Symbol
xiap
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
clum04210
Apoptosis
clum04217
Necroptosis
clum04510
Focal adhesion
clum04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117737091 (xiap)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117737091 (xiap)
04217 Necroptosis
117737091 (xiap)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117737091 (xiap)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117737091 (xiap)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117737091 (xiap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117737091 (xiap)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117737091 (xiap)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117737091 (xiap)
Peptidases and inhibitors [BR:
clum01002
]
Peptidase inhibitors
Family I32: IAP family
117737091 (xiap)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117737091 (xiap)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117737091 (xiap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117737091
NCBI-ProteinID:
XP_034398635
Ensembl:
ENSCLMG00005020442
LinkDB
All DBs
Position
10:complement(7598212..7603550)
Genome browser
AA seq
459 aa
AA seq
DB search
MCDLRQDSNLEADHMADFSQMNCRLDSYRGSSLAQQVPAENLARAGFYFTGPADRVRCFS
CQKTVENWCKGDTPVERHKEVSPSCSFLICTHRTNFNLSGENRMTNGSTYNEEAEDMEYR
LRTGEVVDESTYPIAPHMRSEEARLQTLSSWPSTAPVRPRDLAQAGLYYLGVDDRVQCFC
CGGMLAGWEAGDTAWAEHTKHFPYCFFILGHDVGNVPFQGGIEEEEESSSRQHANVCVPM
GRLEERLGSFAGVLHPIDHERLATAGFYSAGTGEDKVLCFRCGGGLKGWQPEEDPWEEHA
KHYPGFLLAEKGQEFVNTIQLQDPRRNRAASSHPNGFSGHGNEVLQSAMAQMAIGTGLEP
SVVEKTILEKINKTGSGYASLEALMEDCLNNSPEQDEDPLEKLRELQREKQCKICMDRDI
VIVFIPCGHLVTCKKCSESLVKCPICCGAITQKIQTYIA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatctcagacaagacagcaacttggaggcagaccacatggcggatttttcccag
atgaactgtcgcctggactcataccgcggctccagtttggcccagcaggtaccagcagaa
aacttggcccgggccggcttctacttcactggccctgccgatcgtgtccgctgtttcagt
tgccagaagactgtggaaaactggtgcaagggagacacacctgtggagaggcataaagag
gtttccccatcatgcagctttctcatctgcacccaccgcaccaatttcaacctaagtggt
gaaaacagaatgaccaacggttccacatacaacgaagaagcagaagatatggaatatcgc
ttgagaacaggagaggtggtcgatgagtccacctacccaatagcccctcacatgaggagt
gaggaggccaggcttcagaccctctcttcttggccctctactgctcctgtgagacccaga
gatctggcacaggccggcctctactacctaggcgtggacgaccgggtgcagtgcttctgc
tgtggtggcatgctggctggttgggaagcaggggacaccgcctgggcggagcataccaaa
catttcccctactgcttcttcatcctcggtcacgatgtgggcaatgtcccattccagggg
ggtatagaggaggaggaggagagcagcagcagacaacacgctaacgtgtgtgtccctatg
gggaggttggaggagaggcttggcagctttgcaggtgtcttgcaccccattgaccacgag
aggcttgccacagctggcttctacagcgcagggacaggagaagacaaggtcttgtgtttc
cgctgtggtggaggcctgaaaggctggcagccagaagaagacccttgggaagaacatgcc
aaacactaccctggcttcctgctagcagaaaaaggacaagaatttgtcaacactatccag
ctacaagacccacgacggaatagagctgcttcaagtcatccgaatggattttctggacat
ggaaatgaggtgctgcagtctgccatggctcagatggccattgggacgggtctggagccc
agtgtggtggaaaagaccatcttggagaaaatcaacaagacaggctccggctacgccagc
ctggaagcactcatggaggattgtcttaacaactcaccggagcaagatgaggacccgctg
gagaaactgcgggagctgcaaagggagaaacagtgcaaaatatgtatggacagagatatt
gttatcgtcttcatcccatgcggacatctggtcacctgtaagaagtgttcagagtcgctc
gtcaagtgtccaatctgctgtggagccataacgcagaagatccagacctatatcgcttaa
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