Cyclopterus lumpus (lumpfish): 117737231
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Entry
117737231 CDS
T09199
Symbol
egf
Name
(RefSeq) pro-epidermal growth factor
KO
K04357
epidermal growth factor
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04012
ErbB signaling pathway
clum04020
Calcium signaling pathway
clum04068
FoxO signaling pathway
clum04510
Focal adhesion
clum04540
Gap junction
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117737231 (egf)
04012 ErbB signaling pathway
117737231 (egf)
04068 FoxO signaling pathway
117737231 (egf)
04020 Calcium signaling pathway
117737231 (egf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117737231 (egf)
04540 Gap junction
117737231 (egf)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117737231 (egf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117737231 (egf)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Growth factors (RTK binding)
117737231 (egf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
cEGF
EGF_3
EGF_CA
DUF5050
EGF
Motif
Other DBs
NCBI-GeneID:
117737231
NCBI-ProteinID:
XP_034398892
Ensembl:
ENSCLMG00005007970
LinkDB
All DBs
Position
10:complement(20405581..20418707)
Genome browser
AA seq
1034 aa
AA seq
DB search
MDLDGKNQRRLVAGVGSSMLLDFHFREERVYWADKHTGVIYKASVRGAHRQKLYSSDKHI
SGLAVDWIWNRVYWTSGEKGKIKTMDINGKNERTLLRHLTQPHSVNVDPTSRFLFWLSGG
TTPSIQRSDVTGQMKTTLIKMAGQLEALSIDREDNRLFWVQFGLQGEGAIASCDYNGNIL
HIMDRPLWSQSPGISVFLEHLYYTDAASRVIKQVNKYAGGEPLIVNIKQMAKPPVNIKVV
HPLNQPMADSQSSVPGCDEQSGKCVNVCSGLAEQAACQCSEGFALSKQGTYCEDVNECAH
WNHGCSLGCENIPGSYFCTCPKGYALLPDRKTCGEIVPCEGNTTRKCVHGCLITDKGAVC
VCPEGSSLQEDGQACTGCSSADRGGCSQLCTPVAPSGRRCGCLPGYQLHQDGRRCMASGP
PPYLLVANLVDVREIHPEGTGDRTLVEDPRGTIIALDYDPVQKNVYFASASRKTIERVDL
NGGSRDVLVSDGLDSPEGLAIDWVHRRMYWTDKGRSNVDCSTLTGRNRETIVSKGLERPR
GIAVHPLAKKLFWTDIGAHPVVERSSLEGKERTVIASTDLVSPSGLTIDFTEDRLFWCDQ
RRGRVETAALDGSDRQVLLENQVGRPFDLAVFEDRLWMSDGEHQQLRSVHKRTGRKLQRI
RGDLVQPASIVVVHPLAKPGADVCLHLNGDCAQVCESKLGSAHCSCLSGHVLSADGRSCP
PAGSSSGTAESGGSESDDSTFTENKTPLKTPDEAEPDLDSEPTLYTDKMVSDQSVCSALG
CDVNAQCLLRAGSPSCLCLDGFTGDGQLCVELKTPSPWVTTGSPADVSTRHRDSNSVESC
PSSHESYCLYQGVCFYFPEMESYACNCVSGYMGERCQFSDLEWWELQQAEEEKRRNVVIA
ACTVALVSLLSIAACVTYCYGTRTFFHKQPSVDNVSETSETDESVSETTTTSVARFYMAA
VNGEEGMVIPAMGCPRRAVCPSCSSELGDNHASDESGTLSKHNRGYECSMVSAVAVETTQ
ARCPSLKSVSDELM
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgatgggaagaaccagagaagactcgtggctggagtgggaagctccatgctg
ctggactttcatttcagagaggagagagtctactgggctgacaaacacacgggggtcatc
tacaaggcgtccgtgagaggagctcacagacagaaactgtactcatctgacaaacatatc
tcgggcctcgcagtggactggatttggaaccgtgtctattggacgagtggagaaaaggga
aaaatcaagacaatggatataaatgggaaaaatgaaaggactcttttaagacacttgacc
caaccacattctgtaaacgttgaccccactagcaggtttcttttttggctgtctggcggg
acgacccccagtatccagcggtccgatgtgacaggacagatgaaaacgacactcattaag
atggccggacaactggaagccctgtcaattgaccgagaggacaacagactgttctgggtt
cagtttggtctccaaggagagggtgccattgcctcttgcgattacaacggcaacatcctg
cacatcatggatcggccactttggtctcagtcaccggggatatcagttttcctggagcac
ttgtactacactgatgcagcatctcgggttataaaacaagtaaacaagtacgctggtgga
gagccactgattgttaacataaaacaaatggcaaaacccccagttaatatcaaggtggta
catcccctcaaccagccaatggcagactcccaatcatctgttccaggttgtgacgaacag
agtggaaagtgcgtgaatgtgtgttccggtctggccgagcaggcggcgtgccaatgcagt
gaaggcttcgctctcagtaagcaaggcacttattgcgaagatgtgaatgaatgtgcccac
tggaaccacggctgctctctgggttgtgaaaacatccccggctcctatttctgtacctgc
cctaaagggtatgccctcctcccggacaggaagacatgtggagaaatcgtaccatgcgaa
ggcaatacgaccaggaagtgcgtccatgggtgcctgataacggacaagggtgctgtctgt
gtgtgtcctgagggatcttcactgcaggaggatggacaagcctgtactggctgctcgtct
gcagacagagggggctgcagtcagctctgtactcccgtcgccccgagcgggcggcgctgt
ggttgtctgcccggctaccagctccaccaagacggcaggcgctgcatggcctctggaccg
ccgccgtatctactcgtggcaaatctggtggacgtacgagaaattcatcctgaaggcacc
ggggatcgaaccctcgtggaggatccgaggggaacgatcatagctttggactatgaccct
gtccagaaaaatgtgtactttgccagcgcaagccggaagacaatcgagcgggtggatctg
aacggcgggtcgagggacgttctggtctctgatggtttggactctccggagggactggcg
atcgactgggtccaccgcaggatgtactggacggataaaggccggtccaatgtggactgc
agtaccttaactgggcggaacagagaaaccatcgtcagcaaagggctggaaagaccacga
ggaatcgcggttcaccctttggcaaagaagttgttctggactgacataggggcccatcct
gtcgtggaaaggtcctctttggaggggaaggagcgcaccgtcatcgccagcaccgacctt
gtgtcaccgagcggcctgaccatcgacttcacggaggaccgtctgttctggtgcgaccag
aggaggggccgggtggagaccgccgctctggatggctcagatcgacaggtcctgttagag
aaccaagtaggtcgaccttttgaccttgcggtatttgaggacaggttgtggatgtccgat
ggggagcaccagcagctgaggagcgttcacaagcggaccgggagaaaactgcagcgcatc
cgcggcgacttggtccaaccggcgtccatcgtggtggttcatcctcttgcgaaaccaggg
gccgacgtctgccttcacctgaatggagattgcgcccaggtgtgcgagagcaaactggga
tccgcccactgctcctgcctgtcgggccacgtcctgtcagccgatggaagaagctgcccg
cccgccggctcctccagtggaacagcggaatctggaggcagcgaatccgacgattcgacg
ttcaccgagaacaaaacacccctgaagacaccggatgaagcggagcccgatctggactct
gagccaactctctacacggacaagatggtttcagaccagagcgtgtgctccgccctgggc
tgtgatgtcaacgcacagtgcctgctgcgcgccggcagcccgagctgtctgtgtctcgat
ggctttaccggtgatggacagctgtgtgtggagttgaagaccccgtcgccgtgggtgacg
accggcagccccgctgacgtctccacccggcaccgcgacagtaactcagtggagagttgc
ccgtcctcccacgagtcctactgtctgtaccagggcgtctgcttctactttcctgagatg
gagtcctacgcgtgcaattgtgtctcgggctacatgggggagcgttgtcagttcagcgac
ctggagtggtgggagcttcagcaggccgaggaggagaagaggaggaacgtggtcatcgcg
gcctgcacggtggccctcgtttccctgctctccatcgccgcctgtgtcacctactgttac
ggaaccagaacattcttccacaaacagccctcagtggacaacgtgagcgagaccagcgag
acagacgagagcgtgtcggagaccaccacgaccagcgtggctcggttctacatggcggca
gtaaatggtgaggaaggaatggtcatcccggccatgggctgtcccaggagagccgtctgt
ccttcctgctcttcagaactaggtgacaaccatgcgtctgatgagtcgggaacgttgtcc
aaacacaaccgagggtatgagtgttccatggtgtcggctgttgccgtggagaccacgcaa
gcccgctgtccatcgctcaagtccgtctccgacgagctcatgtag
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