Cyclopterus lumpus (lumpfish): 117738741
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Entry
117738741 CDS
T09199
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117738741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117738741
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
117738741
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
117738741
NCBI-ProteinID:
XP_034400725
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Position
11:19563281..19573922
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AA seq
871 aa
AA seq
DB search
METDGEQNQQGASTNGSAASGTSSRPSPMNSMSLYERQAVQALQALQRQPNAAQYFQQLM
LQQQISNAQFQNLAAVQQVKATLAASRQSGPSSVGSPQTSSTAAASVTSGSTASSRPVGA
PTTSTISQSVLLSGAAGGQGQMYLRVNRSLRAPISSQLIFMPGNTAAAAVATVTQQPRAQ
QQEVAPTSSSGGQLDNNQVQNLAMRGVSALKGVGVKTEAPERSDSAAYSFVQPSQSPSKP
SQPPHIKIPTYPQPTNLKAHPSSSASSIPLSQLLLHGTRTLAAGTTASAAGHTLVLTSGG
GGGVSAVKPAGSAQTLVVQPLQKTSFGAEKSGHGGGPVPIQPKTLQGLRLPLQLPSRNPP
PILPAPPPVSSAAQPAPAPPPPPHIPVQIVGARQSTLGNTKALALARGSCCQDGGSSSLL
TVVASIACREGGVVGRGAGLKALQSPQEAPPLAQVSQVRPQAKQSSGPSHSGPLTSIPAS
SQAPAASSPPAAMSRSSLSLPLATEERRGAAAAVTANGDSSRSQTPQGKHLTGSLKRKSD
STSANDEDGPSPPRLQPVRNHASALPTNPSEAGLGAPLPVSPSPSPMLPGSRGVCQGERA
PPPQAVVKPNVLTHLIEGFVIQEGAEPFPMCGSVKDSTLTDDGPDANQSETVTAATVLKC
EYCKNFAPASQFRGTKRFCSMTCAKRYNVSFRQHFCMRQGQGQGQGQLSNSDEEGGIARR
RVPRRTSSEIASAKIAGRPPPVKVRGSRSESSHSDEESSGEEDEDDPVSLSSASSASCRP
PPPPSPPPPPLPAESSAPGCLPAGPAQWSVGEVSQFISSLQGCEEVASQFLSQEIDGQAL
LLLKEEHLMSTMNIKLGPALKICAHINTLRD
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggagacggatggagagcagaaccagcagggggcctcgaccaatgggagcgctgcatct
gggacgagctcccgcccctctccaatgaattccatgtctctgtatgaaagacaagcggtg
caggcgctgcaggcgttacagaggcagccgaatgcagctcagtacttccagcagctgatg
ctgcagcagcagatcagcaacgcgcagtttcagaacctggcagccgtgcaacaggtaaag
gctactctggctgccagtcgtcagtcaggtccctccagcgttggctctcctcagaccagc
agcaccgcggccgccagcgtgacgtctgggtcgacagccagcagccgccccgtgggcgcc
ccgacaacgtccaccatcagccaatcggtgctgctgagcggggcggcgggggggcagggc
caaatgtacctgagggtcaaccgctccctgagggcccccatctcctcgcagctcatcttc
atgcccggcaacacggccgctgctgccgtggcaaccgtcacccagcagccgcgggcccag
caacaggaagtggcgccgacttcctcctccggcggccaattggataacaaccaggtgcag
aatctcgccatgcgaggtgtgtcggctctcaaaggcgtcggcgtgaagaccgaagccccg
gagaggagcgactcagctgcctactccttcgtccagccctcccagtcccccagtaagccg
agccagccgccccacatcaagatccccacctaccctcagcccaccaacctcaaggcccac
ccgtcctcctccgcctcctccatccctctctcccagctcctgcttcacggaacccggact
ctcgccgcgggaaccacggcttccgcggcggggcacactctggtcctgacgtccggcggc
ggcggcggcgtgtcggccgtgaagccggcgggcagcgctcagacgctggtggtgcagccg
ctgcagaagacgtcgttcggcgccgagaaatcgggccacggcggtgggcccgtccccatc
cagcccaaaactctgcaggggctccgcctgccgctccagctgccgtcgaggaacccgcct
cccatcctgcccgccccgccccccgtcagcagcgccgcccagccggcgccggcaccgccg
ccgccgccgcacatccccgtccagatcgtgggtgcgaggcagagcacgctgggaaacacc
aaggctctggctctggcccggggcagctgctgccaggacggcggctcgtccagcctgctc
acggtggtggcgtccatcgcttgcagagagggcggggtcgtgggccgaggggcggggcta
aaggcgcttcagtcgccgcaggaggcccccccgttggctcaggtgtctcaggtgcgtccg
caggccaagcagagctccggaccgagtcacagcggacccctgacttccatccccgcctcc
tcccaggcgcccgcggcgtcctccccgcccgccgcgatgtctcgctcctccctctcgctg
ccgctggcgacggaggagcggcgaggagcggcggccgccgtgaccgccaacggagactcg
tccagaagtcagaccccacagggtaagcacttgacgggctcactaaaaagaaagtccgac
tcgacttcagccaatgacgaagacggcccctcccctccacggctccagccagtcagaaac
cacgcttcggcactgccgaccaatcccagcgaagcgggcctcggtgctcctcttcccgtc
tccccctccccctcccccatgctgccggggtcccgtggggtctgccagggggagagagct
cctccccctcaagctgtggtgaaacccaacgtcctcacgcacctcatagagggcttcgtc
atccaggagggggccgagcctttccctatgtgtgggtcagtgaaggactccactttaacc
gacgacggtccggacgcgaaccaatcggagacggttaccgcggcgacagtgctgaagtgt
gagtactgtaaaaactttgctcccgccagccagttcagaggcaccaaaaggttctgctcc
atgacttgtgccaagaggtacaacgtcagcttccggcagcacttctgcatgcggcagggt
caaggtcaaggtcaaggtcagctctccaactcggacgaggagggaggaatcgccaggcgg
agggtcccccgcaggaccagctccgaaatagccagcgccaagatagcagggagaccccca
cctgtcaaggtgagagggagccgctcggagtccagccactcggacgaggagtccagcggc
gaggaggacgaagacgaccccgtgtcgctgtcgtccgcctcctcggcgtcctgccgcccg
ccgccgccgccttctcctcctcctcctccgctcccggcggagagctcggcgcccggctgc
ctgcccgccggccccgcccagtggagcgtgggggaagtgtcgcagttcatttcctcgcta
caaggctgcgaggaggtcgcctcccagttcctgtcgcaggagattgacggacaggccctg
ctgctgctgaaagaggagcacctcatgtccaccatgaacatcaagctaggtcccgccctc
aagatctgcgcccacatcaacaccctgagagactga
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