Cyclopterus lumpus (lumpfish): 117738769
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Entry
117738769 CDS
T09199
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
KO
K06751
MHC class I antigen
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
clum04145
Phagosome
clum04218
Cellular senescence
clum04514
Cell adhesion molecules
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117738769
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117738769
04145 Phagosome
117738769
09143 Cell growth and death
04218 Cellular senescence
117738769
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117738769
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117738769
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117738769
Exosome [BR:
clum04147
]
Exosomal proteins
Proteins found in most exosomes
117738769
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Antigens
117738769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
Motif
Other DBs
NCBI-GeneID:
117738769
NCBI-ProteinID:
XP_034400773
Ensembl:
ENSCLMG00005007637
LinkDB
All DBs
Position
11:18406613..18412206
Genome browser
AA seq
364 aa
AA seq
DB search
MNPLLVLLLFCHDASTVMHSLRYFLTATSGVPNFPEFVGAAVVDDVLVGYCDSDAKTAKP
KQDWMKEFIKDDPTRGEWYAEKCFRNRQVFRDRMEGLKRRLNQTGGVHVLQRMNGCEWDD
ETGEVVGYNQYGYDGEDFIALDLRTLTWIAPKQQAFITKLRWDAEEERLKYNEYYYIYKC
PEWLKNYVHYGKSLLQRTDLPTVSLLQKTPSSPVCCHATGFYPKSAAMFWRRDGEEIHED
VAPGEILPNHDGSFQMSVDLKLSSVAPGDWSRYECVFRLSGVEHDVVTGLDRARIRTNWV
TPSEFPTGAVMGGVVPLLLLAIGIAGFMWRWHKNGFRLANTSDSSSSTDRDSATARTTSF
QPLS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgttactcgtgttgctcctcttctgtcatgatgcatcgacagtgatgcactcc
ctgagatatttcctcaccgcaacttctggagtcccaaacttcccggagttcgtgggcgcc
gcggtggtcgacgacgtcctggtgggctactgcgacagcgacgccaagaccgccaagccc
aaacaggactggatgaaagagtttataaaagacgaccccacgcgcggggagtggtacgct
gagaagtgttttcgcaatcggcaggtcttcagagaccgcatggaaggcctgaagaggcgc
ttaaaccaaaccggaggcgtccacgttttgcagaggatgaacggctgcgagtgggacgac
gagaccggagaggtcgtcggttacaatcagtacggttacgacggcgaggacttcatcgcg
ttggacctgcggacgctgacgtggatcgctcccaagcagcaggcgttcatcaccaagctc
agatgggatgccgaggaagagagactaaaatacaatgaatattactacatctacaaatgt
ccggagtggctgaagaattatgtgcactatgggaagagccttctgcagagaacagacctt
cccacggtgtctctcctccagaagaccccctcctccccggtctgctgccacgccacgggc
ttctacccaaagagcgccgcgatgttctggaggagagacggggaggagatccacgaggac
gtggcccccggggagatcctccccaaccacgacggatccttccagatgagcgtggacctg
aaactctcctcggtcgcaccgggagactggagcaggtacgagtgcgtgtttcggctctcc
ggcgtggagcacgacgtcgtcaccggactggacagagcgcggatcaggaccaactgggtt
actccgtcagagtttcccaccggtgccgtgatgggaggcgtcgtccctttgcttcttctt
gcaatcggcatcgctggattcatgtggaggtggcacaagaatggattcagactcgcaaac
acttcggattcttcgtcgtcgacggaccgagattcagctacagcgagaacgacgtcgttc
caaccactttcataa
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