Cyclopterus lumpus (lumpfish): 117738775
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Entry
117738775 CDS
T09199
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
KO
K06751
MHC class I antigen
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
clum04145
Phagosome
clum04218
Cellular senescence
clum04514
Cell adhesion molecules
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117738775
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117738775
04145 Phagosome
117738775
09143 Cell growth and death
04218 Cellular senescence
117738775
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117738775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117738775
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117738775
Exosome [BR:
clum04147
]
Exosomal proteins
Proteins found in most exosomes
117738775
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Antigens
117738775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_II_beta
Ig_3
LapA_dom
Motif
Other DBs
NCBI-GeneID:
117738775
NCBI-ProteinID:
XP_034400782
LinkDB
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Position
11:complement(20001661..20009469)
Genome browser
AA seq
357 aa
AA seq
DB search
MTWTLCLLMMSLHGAAAVTHSLKYFDTASSGVPNFPEFVIVGLVDELPISHYDSKTRRAE
PKQDWMRRVTEQDPQYWKRETEKSLGAQQVYKVDIETLKQRFNETGGVHIVQRMYGCEWD
DETGEVKGYQQYGFDGEDFLSYDHETESYIAPRQQAVITQQRWNNNKALMANKKHYFTEE
CPEFLKKYVNYGRSSLMRTELPSVSLLQKTPSSPVCCHATGFYPTTATLFWRKDGEELHE
DVDPGEILPNHDGSFQMSVDLKLSSVPAEDWRRYECVFQLSGVKDIIVTPLEEAVIRTNR
EKSSDTTIITIIIIVLAVGALLAVAVGGVAYKKRTAQCPPSPDNSSELSENLNPETQ
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggactctgtgtctcctgatgatgagccttcacggcgcggcggcagtgactcac
tctctgaagtactttgacactgcgtcctctggagtcccaaacttcccagagtttgtgatt
gttgggctggttgatgaacttccaataagtcactatgacagtaagaccaggagagcagaa
cccaaacaggactggatgaggagagtcacagaacaggatcctcagtactggaagagagag
actgagaagtctttgggcgcccagcaggtctacaaagtcgacattgaaactctaaagcag
cgcttcaatgaaactggaggtgtccacattgtccagaggatgtacggctgtgaatgggac
gatgagactggtgaggtcaaaggttatcaacagtatggttttgatggagaagacttcctg
tcttatgaccatgagacagagtcctacatcgctcccagacaacaggctgtcatcacccaa
cagaggtggaataacaacaaagctctgatggcaaacaaaaagcactacttcactgaggag
tgtcctgagttcctgaagaagtatgtgaactatgggaggagctctctgatgagaacagag
cttccctcagtgtctctcctccagaagactccctcctctccagtctgctgccacgctaca
ggcttctacccgaccacagccacactgttctggaggaaagatggagaggagctgcacgag
gacgtggacccaggagagatcctccccaaccacgacggatccttccagatgagcgtggac
ctgaagctctcatcagtcccagctgaagactggaggaggtacgagtgtgtgtttcagctg
tctggtgtgaaggacatcatcgtcaccccactggaagaagctgtgatcaggaccaacaga
gagaagtcttctgacaccaccatcatcaccatcatcatcatcgtcctcgctgtgggggct
cttctggctgtcgctgtggggggagtggcttacaaaaagaggacagcccaatgccctccg
agtcctgacaacagctccgagctctctgagaacctgaaccctgagactcagtga
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