Cyclopterus lumpus (lumpfish): 117739401
Help
Entry
117739401 CDS
T09199
Symbol
rapgef5a
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 5
KO
K08019
Rap guanine nucleotide exchange factor 5
Organism
clum
Cyclopterus lumpus (lumpfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
117739401
NCBI-ProteinID:
XP_034401677
LinkDB
All DBs
Position
11:11817026..11859223
Genome browser
AA seq
898 aa
AA seq
DB search
MEDSEPAEDGLLAGLRWNRSARDQAQLKHKIRDLPGLLKHGLHLRKKSQSPDTIPGPSTG
PTVHKSCSQSFPCAGRAVRNAFVSHGPYPAKDKIHLARIIRRSYVGVELVQWLCEQCLYV
RCRTTAVRIWQVLLELGVLLSVDQRVMFSDSNSYYQFSFEECDSASCDFRSNEGEWPEAV
RLLLQLAPYIQFRSGGGANSPSEEDSEGNRDICSEILQMKALERLTSTVQCELAAALARK
TRKALSEQDSETTETSQQEPQTLSEESSPLSGVCALRGGGGSGGGSSGGGGGMGTVCGRE
ELTSRLGLEAVQRLAKDGCRLLQNHNYRLPDRNQAEAVGRVCLKERGRDVLVLRRVTSSV
TSPSDRPSPTSSGGGAREEDCDKRYVVVSGTPLKILEHLLSDLRLDDQRGAPESRESETL
LDDFLLTYLVFMSTNDLCQALLGHYSSARCRAREEGRDALFRKRKVLQLVSHXSRLYKDC
LKEEEHVRSFMKTLYRCVLEDLYEFPTLEKDLQEFQKLLRRRHTVDDCPPSQKSKQMYQQ
LSLKENSLQVRSPPTDTREVICCVHVSADSYLSVHTHPSLEAHELLRIVGLKMDRAEEDM
VLAVKSHTGERRVLQPSDCVYSESLTPQGKLVACRRDLTEILPPLTDSAELSKRPVRLLG
INTWDVAAALTHLDWSLFKSIHEQELAYYTLSRVPGTGHTAALSVLLQRCNEVQQWVMSE
VLMCVSLNKRVQLLKKFIKIAAHCKAQRNLNSAFAIIMGLNTASVSRLNQTWEKCPGKFK
KLFSELELITDPSLNHKAYREAFKKMKPPKIPFMPLLLKDITFIHEGNKTFHDNLVNFEK
LHMIADTVRMIRHCQSDQPGNEVIGVDSAEVRASVHYLHIIDNQQTLFELSHKLEPRA
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcggagcccgcagaggacggcttgctcgcgggcttgcgatggaaccggagc
gcacgggaccaggctcagttgaaacacaagatccgggatctgccagggttactcaagcac
gggctgcacctgcggaagaagagccaatcacctgacactatccccggaccgagcactgga
cctacagtacacaagtcatgttcccagagttttccatgtgctggtcgcgctgtgaggaat
gccttcgtctctcatggaccatacccggctaaagacaagatacacctggccagaatcata
cggcgcagctacgtgggtgtggagctggtgcagtggctgtgtgagcagtgtttgtacgtg
cgctgccggaccactgctgtgcgcatctggcaggtgctgctggaactgggagtcctgcta
tctgtagaccagcgggtgatgttttcagattccaactcttattaccagttcagctttgag
gagtgtgactccgcctcctgtgactttcgctccaatgagggggagtggccagaggcggtt
aggctcctccttcaacttgccccgtacatccagtttcgctctggaggcggagccaacagc
ccgtcagaggaggactctgaaggcaacagggacatctgcagtgagattctccagatgaaa
gctcttgaaaggctcacttctacggtacaatgtgagttggctgctgctcttgcccgaaag
actcgcaaagctttgtcagagcaggactctgaaacgacggagacgagccaacaggaacca
cagacactcagcgaggagagcagcccgctgagcggggtgtgtgcactgcggggtggcggt
ggcagcggtggcggcagcagcgggggaggaggaggaatgggaactgtgtgcggccgcgag
gagctgaccagccggctggggctggaggccgttcagcggctggccaaggatggctgtcgg
ctgctgcagaaccacaactaccggctgccggacaggaaccaggcggaggcggtggggagg
gtttgtctgaaggagagaggacgggatgtgctggtgttgcggagagtgacatcgtcagtg
acgtcgccgtcagaccggccttcacccacgtcgtcagggggcggagccagagaggaggat
tgcgacaagaggtatgtggtggtgtcggggacaccgctcaagatcttggagcatctgctg
agtgacctgcggttggacgaccaaagaggggcgccagagagtagggagagcgaaacactg
ctggatgacttcctgttgacttacctggtgttcatgtccaccaatgacctctgtcaggct
ctgctaggacactatagcagtgctcgctgcagggccagggaggagggcagagatgccctc
ttcaggaagcgtaaagtactgcagctagtctcccacntgagcaggctctacaaggactgc
ctgaaggaagaggagcacgtcaggagcttcatgaagaccttgtacaggtgtgttttagaa
gatctgtatgagttccccacactggagaaagacctccaggagttccagaaacttctgcgt
cgcagacatactgtcgatgactgtcctccaagccaaaagagtaaacaaatgtatcagcag
ttgagtttgaaggaaaacagtttgcaagtcagaagtccaccgactgatactcgagaggtc
atttgttgcgtgcatgtgagcgctgactcctacctgagtgtccacacacatccttcactg
gaggcccacgagctgctaagaattgtgggtctgaagatggacagagcagaagaagacatg
gtgcttgctgtgaagtcgcacactggagagcggagggtgttacagcccagtgactgtgtg
tattcagagtctctgaccccacagggaaagcttgtggcctgtcgcagggatctcactgag
attctgcctcctttaacggacagtgctgagctaagcaagaggccggtgagactcctaggt
attaacacctgggatgtggcagctgctctcacacacctggactggagcctcttcaaatcc
atccacgagcaagagctcgcttactacaccctcagccgcgttcccggtaccggccacacg
gcagcgctctcagtgctgctgcagcgctgtaatgaggtccagcagtgggtcatgtcggag
gtgctcatgtgtgtgtcactcaacaagagagtacagctgcttaagaaattcatcaagatc
gcagctcattgtaaagcccaaagaaatttgaactctgcatttgccatcatcatgggttta
aacacagcatctgtaagccgactcaaccaaacctgggagaaatgtccggggaagttcaag
aagcttttctcagagttggagctcatcacggatccatctctgaaccacaaagcctatagg
gaagccttcaagaagatgaagcctcccaagatccctttcatgcctcttctcctgaaagat
atcacattcatccatgagggaaataagaccttccacgacaacctggtcaactttgagaag
ctgcatatgatcgcagacacagtgagaatgattcgccactgccaaagcgaccagccaggc
aacgaggtaatcggggtcgacagtgcggaggtgagggcgagcgttcattacctgcacatt
atcgacaatcaacagacgcttttcgagctgtcgcacaagctcgagccacgcgcttaa
DBGET
integrated database retrieval system