Cyclopterus lumpus (lumpfish): 117739586
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Entry
117739586 CDS
T09199
Symbol
ext1b
Name
(RefSeq) LOW QUALITY PROTEIN: exostosin-1b
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
clum01100
Metabolic pathways
Module
clum_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
117739586 (ext1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117739586 (ext1b)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
117739586 (ext1b)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
117739586 (ext1b)
Glycosyltransferases [BR:
clum01003
]
Glycan extension
O-Glycan
117739586 (ext1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
117739586
NCBI-ProteinID:
XP_034401983
Ensembl:
ENSCLMG00005001450
LinkDB
All DBs
Position
11:5735098..5825943
Genome browser
AA seq
741 aa
AA seq
DB search
MQAKKRYLILLSAGACLLLLSYLGGVQLPAASRSRHDRSRTGYRPDQPWPHFSDPLHLFS
PVGHTDTEEYNLHISPRQKRDGTASVYKGKRCRVDSCFDFAPCQRNGFKVYVYPQQKGEK
ISESYQNILSTIEGSRFYTSDPGQACLFILSLDTLDRDQLSPQYVHNLKTKVQSLPLWND
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFRPNFDVSIPLFSKEHARTGG
DRGFLKYNAIPPLRKYVLVFKGKRYLTGIGSDTRNALHHVHNAEDVVLLTTCKHGKDWQK
HKDARCDKDNAEYDKYDYKEMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIIDWNTAAVIGDERLLLQIPTTVRSIHHDKILSLRQQTQFLWEAYFSSVEKIVLTT
LEIIQDRVLEHGSRSSLLWNSHPGGLFALASTYSGYLGDFPFYYATLGIKPYPKFTAVIH
AVSPLVSQSQPILKLLVAVAKSQYCAQIIVLWNCDKPLPAKHRWPATSVPVIVIEGENKV
MSSRFLPYETIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDSNKER
WGYTSKWTNDYSMVLTGAAIYHRYYHHLYTNYLPTSLKGMVDQLANCEDILMNFLVSAVT
KLPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGAMPLVHSQMRLD
PILFKDQVSILRKKYRDIERL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgctacctgatcctgctctccgccggcgcatgtctgctgcttctc
tcctacctcggaggggtccaacttccagcggcgagcaggagccggcatgaccgcagccgg
accgggtaccgacccgaccagccctggccgcacttctcggacccgttacaccttttctcg
cccgtgggccatacggacacggaggagtacaacctgcacatatcgccgcggcagaagagg
gacggcaccgcgagcgtctacaagggcaagcggtgccgcgtggactcctgcttcgacttc
gctccgtgccaacggaacggattcaaagtgtacgtgtacccgcagcagaagggggagaag
atctccgagagctaccagaacatcttgtcgaccatcgagggctccaggttttacacctcg
gaccccgggcaggcgtgtctgttcatcctgagtctggacactctggaccgggaccagctg
tccccgcagtacgtccacaacctgaagaccaaggtgcagagcctgcccctgtggaacgac
gggaggaaccacctcatattcaacctgtactcggggacgtggccggactacacggaagac
ctgggcttcgacatcggccaggccatgttggccaaggccagcatcagcaccgaaaacttc
cggcccaacttcgacgtgtccatcccgctgttctccaaggagcacgcgcggaccggcggg
gaccggggcttcctcaagtacaacgccatcccgccgctccgcaagtacgtgctggtgttc
aaggggaagcgctatctgacgggcatcggctcggacaccaggaatgccttgcaccacgtg
cacaacgccgaggacgtggtgctgctcaccacctgcaagcacggcaaggactggcagaag
cacaaggacgcgcgctgcgacaaggacaacgcggagtacgacaagtacgactacaaggag
atgctccacaactccaccttctgtctggtgccccgcggcagacggctgggctcctttcgc
ttccttgaggcgctgcaggctgcgtgtgtgccggtgatgctgagtaacggttgggagctg
cccttctccgagatcatcgactggaacacagccgcagtgatcggcgacgagaggctcctg
ctgcagatcccgaccacggtgcgctccatccaccacgataagatcctgtccctcagacag
cagacccagttcctctgggaggcctacttctcctccgtggagaagatagtgctgaccacg
cttgagatcatccaggaccgcgtgttggagcacggctccaggagcagcctgttgtggaac
agccaccccggagggctcttcgccctggccagtacttactccggatacctgggagacttc
cccttctactacgctacactgggtatcaaaccctaccccaagttcacagcggtcatccac
gccgtctcgcccctggtgtcccagtcccagcccatactcaagctcctggtagccgtggcc
aagtcccagtactgtgcacagatcatcgtcctgtggaactgtgacaagcctctgccggcc
aagcaccgctggcccgccacctcagtgcccgtcatcgtcatcgagggggagaataaggtg
atgagcagccgcttcctgccctacgagaccatagtgaccgacgctgtcctcagcctggat
gaagacacagtgctgtccaccacagaggtggatttcgccttcacggtctggcagagtttc
cccgagcgcatcgtgggctaccccgcccgcagccacttctgggacagcaacaaggagcgc
tggggctacacatccaaatggactaacgattactcaatggtgctgaccggggccgccatc
taccacaggtactaccatcacctgtacaccaactacttacccactagtctgaagggcatg
gtggaccagctggccaactgcgaggacatcctgatgaactttctggtctccgctgtcacc
aagctgccgcccatcaaggtcacgcagaagaaacagtacaaggagaccatgatgggacag
tcttcgagagcttctcgctgggccgacccggaccactttgcccagcggcaaacctgcatg
aacaagttcgccagctggtttggcgccatgccgctggtccactcccagatgagactggac
cccatcctgttcaaggaccaggtctccattctccgcaagaaatacagggacatcgagagg
ctctga
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