Cyclopterus lumpus (lumpfish): 117740371
Help
Entry
117740371 CDS
T09199
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00280
Valine, leucine and isoleucine degradation
clum00650
Butanoate metabolism
clum00900
Terpenoid backbone biosynthesis
clum01100
Metabolic pathways
clum03320
PPAR signaling pathway
Module
clum_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117740371 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117740371 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117740371 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117740371 (hmgcs1)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
117740371 (hmgcs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
117740371
NCBI-ProteinID:
XP_034402624
Ensembl:
ENSCLMG00005021505
UniProt:
A0A8C3ATJ9
LinkDB
All DBs
Position
12:18820751..18829425
Genome browser
AA seq
515 aa
AA seq
DB search
MPGSAPISCLGPWPKDVGIIALELYFPSQYVDQAELEQLDGVTAGKYTVGLGQARMGFCS
DREDINSLCLTVVQRLMERNRLSYDSVGRLEVGTETIIDKSKSVKTVIMQLFEDSGNTDV
EGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGGAGAVAML
VGPNAPLAFERGLRGTHMQHAYDFYKPDLMSEYPVVDGKLSIECYLSALDRCYSVYRNKI
HTQWQRDGSEKRFSLDDFGHLIFHSPYCKLVQKSLARLMLNDFLNHPSPNTDTGPFTGLD
AFRDVRPEETYFDRDVEKAFMKASADLFERKTKPSLLISNQNGNMYTPSVYGCLASLFAE
HTSSQLAGQRIGVFSYGSGFAATLYSLRVTQDHTPGSGLEKLVSSLSDLKVRLDSRQKVS
PAVFSENMKLREETHHLASYIPQGQVEDLFPGTWYLTRIDDKHRREYARRPLDHDLQSEP
ELVRSSTATEHIPSPAKKMPRIPAASASTEAAVSN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgccaggatcagcaccaatcagttgcttaggaccatggcccaaagatgtaggtatcatt
gctttggaattgtacttcccgtcccagtatgtggaccaggccgagctggagcagttagac
ggtgtaacagctggtaaatacaccgtgggcctgggccaagcccgtatgggcttctgctca
gatcgtgaggacatcaactctttgtgcctgacggtggtccagaggttgatggagaggaac
aggctgtcctatgacagtgtaggtcgactggaggtgggcacagagaccatcattgataag
tccaagtctgtcaagacggtcatcatgcagctatttgaggactctggcaatacagatgtg
gagggcattgacaccacaaatgcctgctacgggggtacagctgcactcttcaatgctgtc
aactgggtggagtccagctcatgggatggacgttatgctttggttgtagcgggggacatt
gctgtctacgccacaggaagtgcccggcctacgggaggtgctggtgcagtggccatgctg
gtcgggcctaatgctcctctggcctttgaacgaggtctacgaggaacccacatgcagcat
gcatatgacttctacaagccagacctgatgtccgagtatcctgtggtggacggcaagctg
tcgatagagtgctacctgagtgccttggaccgctgctactctgtgtatcgcaacaagatc
cacacacagtggcaaagagatggttcagagaagcgtttcagcctggacgactttggccat
ctaatcttccattctccctactgcaagctggtgcagaagtctttggctagattgatgctg
aatgactttctaaatcaccccagccccaacactgacacgggacccttcacaggtctcgat
gccttcagagatgtacgaccggaagagacctactttgaccgggatgtggagaaggccttt
atgaaggccagtgcagatctgtttgagaggaagaccaagccctccctactgatctccaac
cagaacggaaacatgtacaccccctctgtctatggctgcctggcatcactctttgcagag
cacacatcttcacagctggcaggacagaggattggagttttctcttatggttcaggattt
gctgctactctgtattctctcagagtcacacaagaccacacacctggatctggtctggag
aaacttgtgtccagcctgagtgatctgaaagtcagactggactcaagacagaaggtttca
cctgctgtcttctctgagaacatgaagctgagagaagagactcaccaccttgccagctac
atccctcaaggccaagtggaggatctgttcccagggacgtggtacctgacacgaatagat
gacaagcaccgtagggaatatgcccgaagacctctggaccatgatctgcaatcggagcca
gaacttgttcgctctagcactgccaccgagcacatccccagtccagccaagaagatgcct
cgcatccctgcagccagcgccagcacagaagctgctgtcagcaactga
DBGET
integrated database retrieval system
