Cyclopterus lumpus (lumpfish): 117740850
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Entry
117740850 CDS
T09199
Name
(RefSeq) thyrotropin receptor-like isoform X1
KO
K04249
thyrotropin receptor
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117740850
04081 Hormone signaling
117740850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
clum04030
]
117740850
G protein-coupled receptors [BR:
clum04030
]
Rhodopsin family
Peptide
Thyrotropin
117740850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
117740850
NCBI-ProteinID:
XP_034403366
Ensembl:
ENSCLMG00005021908
LinkDB
All DBs
Position
12:19063199..19078776
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AA seq
732 aa
AA seq
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MKPDLNLVFFIFSTFEVTLLEYCPTRCQCDWEIYSVSCVGAEVMPVFHSSTQEVWLVGTK
LSSLPQNAFSNLANIVHIDISDDDTIRYLERHSFHNLPMVTHIQLTGIKTLSYINQEAFK
NLPNLKYLGITNTGLTSFPGLQYIQSSKDDFILEIVENAFLQVIPANSFIGISEKTLTIM
LNGNGVKEIQQYAFNGSRLEEVYLHRNMDLERIDEFAFDGVIQGPTRLDLSETKVSSLPS
MGMETIEKLQAKNTWTLKVLPPFRAFLHLQSAELTFPCHCCGLKRLKRWRGNSEAVICNL
TRTALGKLQESSKVLSQRCHGHTFDHHLNDSFGLQTAEGRNLNNCYHSPICPTEQSQNEG
LFYVELPTEHPNEGFDFALCDEPHIDNHELLCTPLPDALNPCEDVMSQGFLRVLVWVVSP
LAISANFLVMFILLTSQQKFSVTRFLMGHLAFADFCMGIYLLLVASVDLYTRSHYYHYAI
AWQTGGGCNLAGTISVFASELSVYTLTLISLQRWHAIFYAMRADRKIRLRHAAVLMLVGW
LLCVILAVLPLVGVSSYQKVSICLPMDTETPAAQAYVVSVLMLNVIAFIVVCLCYLHIYC
MVHNPQHQFSRCDTSMAKRMAVLIFTNFLCLAPICFYGLSAALHQPLITITDSKVLLVLF
YPLNSCAHPFVYAILTKAFHRDILMLLSRMGLCQRQAHLYRSQLVSIPPYSPAPISQNVQ
ELPGYKMSPNCF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgatttgaatctagtttttttcattttcagtactttcgaggtcactctcctg
gaatattgtccgactcgttgccagtgtgactgggagatctacagtgtgtcatgtgttgga
gctgaggtcatgcctgtattccattctagcacacaggaggtgtggcttgtggggaccaaa
ctttcttctcttcctcaaaatgcattctccaacttggccaacattgttcacatagacatc
tctgatgatgatactataagatatcttgagaggcattctttccacaacctgcccatggta
actcacatacaactaactggtatcaaaacactgtcatacatcaaccaagaggcatttaaa
aatctgcctaatttaaagtaccttgggatcaccaacaccggtctcacctcctttcctggg
ctgcaatatattcagtccagcaaagatgattttattttggagatagtggaaaatgccttc
ctacaagttatacctgctaattctttcattggaatatctgagaaaacgttgaccatcatg
ctgaatggcaatggtgtgaaagagatccagcaatatgccttcaatgggagcagactggag
gaagtgtatctccacaggaatatggatctggaacgtatagatgaatttgcatttgatggc
gttattcaaggaccgacacgcttagacctttcagaaaccaaagttagctctcttccttca
atgggtatggagaccattgaaaaactccaagctaaaaacacttggaccctcaaagtactg
cccccctttagggcctttctccatttacaaagtgctgaattgaccttcccatgccattgt
tgcggtctcaaaaggttgaaaaggtggagaggaaactctgaagcagttatttgcaacctg
acccggactgctttgggaaagctgcaggaatcctccaaagttctctctcagaggtgtcat
ggacacacattcgaccatcatctgaacgacagcttcggtctccaaactgccgaaggccga
aatctcaataattgctatcacagccccatttgcccaactgaacagtctcaaaatgagggt
ttgttttatgtggagttaccaacagagcatcccaatgaaggtttcgactttgctctgtgt
gatgaacctcacatagataatcatgaactattgtgcacccctctgccagatgccctgaac
ccctgtgaggatgtgatgagtcaaggcttcctgagggtgttggtctgggtggtcagtccg
ttggccatttcagccaacttcctggtgatgttcatcctgctgacaagccaacagaagttc
tccgttacccgtttcctcatgggtcacctggcatttgcagacttttgtatggggatatac
ttactgctcgttgcgtctgtcgacctctacacacgctcccattattaccactatgctatc
gcctggcaaacaggaggtggctgcaatctagcagggacaatatcagtgtttgccagcgag
ctatctgtgtacacattaactttaatcagtcttcagcgctggcatgctatcttctacgct
atgagggcagaccgaaaaatccgcttacgccatgcagctgtgctgatgctcgtcggctgg
ttgctgtgtgtgatactagcagtgcttccattggttggtgtgagcagctaccagaaagtg
agcatttgcttacccatggacactgagacacctgctgctcaggcctatgtggtctctgtg
ctgatgcttaatgtcattgcttttatagtggtatgtttatgttacctccacatctactgt
atggtgcacaatccccagcaccagttcagcagatgcgataccagcatggccaaacgcatg
gctgttctaattttcaccaactttctgtgtctggctcccatttgcttctatggcttgtct
gcggctcttcatcaaccattgataaccatcacagattccaaggtgctgctggtgcttttc
tatcctctcaactcttgtgcacacccatttgtttatgctatcctgacaaaggcatttcac
agagacatcctgatgttgctgagccggatggggctgtgccagcggcaagcacacctctat
cgaagccaacttgtcagtattccgccctacagcccagcccccatatcccaaaatgtacag
gaattgccaggctacaagatgtccccaaattgcttctaa
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