Cyclopterus lumpus (lumpfish): 117741227
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Entry
117741227 CDS
T09199
Symbol
tgfb1a
Name
(RefSeq) transforming growth factor, beta 1a isoform X1
KO
K13375
transforming growth factor beta-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04060
Cytokine-cytokine receptor interaction
clum04068
FoxO signaling pathway
clum04110
Cell cycle
clum04148
Efferocytosis
clum04218
Cellular senescence
clum04350
TGF-beta signaling pathway
clum04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117741227 (tgfb1a)
04350 TGF-beta signaling pathway
117741227 (tgfb1a)
04068 FoxO signaling pathway
117741227 (tgfb1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117741227 (tgfb1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117741227 (tgfb1a)
09143 Cell growth and death
04110 Cell cycle
117741227 (tgfb1a)
04218 Cellular senescence
117741227 (tgfb1a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117741227 (tgfb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
clum03110
]
117741227 (tgfb1a)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117741227 (tgfb1a)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117741227 (tgfb1a)
Chaperones and folding catalysts [BR:
clum03110
]
Intramolecular chaperones
Others
117741227 (tgfb1a)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Transforming growth factors (RSTK binding)
117741227 (tgfb1a)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117741227 (tgfb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DUF3837
Motif
Other DBs
NCBI-GeneID:
117741227
NCBI-ProteinID:
XP_034403996
Ensembl:
ENSCLMG00005011794
LinkDB
All DBs
Position
13:12481508..12491223
Genome browser
AA seq
386 aa
AA seq
DB search
MKLAFLALVAVYAVGNVSGMSTCKTLDLEMVKKKRIEAIRSQILSKLRLPKEPEPDQTGD
EEEIPTTLLSLYNSTKEMLREQQTEVLTDISTEQEEEEYFAKVLHKFNMTARNDTGTTKS
SKRIPMFFNISKIRESVGDYRLLTSAELRMLIKQTTIASEQRVELYQGLGASPRYLASRF
VTNQWKDKWLSFDVTETLQNWLKGTEDEQGFQLRLFCECGQSGVDSSFSFTISGIETGRG
DTGMLQMMTKQPPYILTMSIPQNSSSHLTSRKKRSTETTDTCTAQTETCCVRSLYIDFRK
DLGWKWIHKPTGYNANYCMGSCTYIWNAENKYSQILALYKHHNPGASAQPCCVPQTLEPL
PILYYVGRQHKVEQLSNMIVKSCKCS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggcattcttggcactcgtggccgtgtacgcggtgggcaatgtgagcggcatg
tccacgtgtaagacgctggacctggagatggtgaagaagaagcgcatcgaggccatcagg
agtcagatcctcagcaaactgcgcttgccgaaagagcccgaaccggatcagacgggagac
gaggaggagatcccgaccaccctgctgtccctgtacaacagcaccaaggagatgctgagg
gagcagcagaccgaggtcctgacggacatctccacggagcaggaggaggaggagtacttc
gccaaggtgctgcacaagttcaacatgaccgcgagaaacgacacagggaccaccaagtcc
tccaaaagaatcccgatgttcttcaacatctcgaagatacgggaaagtgtgggggactac
cgcctgctgaccagcgccgagctgcggatgctcatcaagcaaaccacgatagcgtctgag
cagcgggtggagctgtaccagggtctgggagcgtcgccccgctacctcgcttcccgcttc
gtcaccaaccagtggaaagacaaatggctgtccttcgatgtcactgagaccctgcagaac
tggctcaaagggaccgaggatgagcagggtttccaacttcggctgttctgtgaatgcggc
cagtcaggtgtcgacagtagcttcagctttaccatctctggcatcgagactggtagggga
gacacaggaatgttacaaatgatgacaaagcaaccaccctacatcctgaccatgtccatc
cctcagaacagcagcagccacctcacctcacgcaaaaaacgctccacggagacaacggac
acctgcacagcccagacggagacctgctgcgtacggagcttgtacatcgacttcaggaaa
gacctgggctggaagtggatacataagcccacgggctacaatgccaattactgcatgggg
tcctgcacctacatctggaatgctgaaaacaaatattctcagattttggccctgtacaag
catcacaacccgggagcctctgcccagccttgctgtgttccccagacactggagcctctg
ccgatcctctactacgtgggcaggcaacacaaggtggagcagctgtccaatatgatcgtg
aagtcctgcaagtgtagctaa
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