Cyclopterus lumpus (lumpfish): 117741353
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Entry
117741353 CDS
T09199
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117741353 (trpc6b)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117741353 (trpc6b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
117741353
NCBI-ProteinID:
XP_034404238
Ensembl:
ENSCLMG00005018451
LinkDB
All DBs
Position
13:11252765..11261011
Genome browser
AA seq
793 aa
AA seq
DB search
MMQQQVGAKLRRQVFRGAGYLYHAQSSSCLSTTEELFLDAAEYGNASEVRRMLEELPELN
VNCMNYMGQNALQLAVANEHLEVTKLLLRKKDLSRIGDALLLAISKGYIRIVDAILSHQA
FANGERLTNRPSQVDTHDDFFAYDEDGTRFSQDITPIILASQCHEYEIVHILLMKGARVE
RPHDYFCQCRTCSEQQRHDSFSHSQSRINAYKCLASPAYLSLSNEDPVMAALELSNELAV
LANIEKEFKNDYKKLSMQCKDFVVGVLDLCRNTEEVKAILNGDSESCQSSETLGRQNLIR
LKLAIKYEVKKLGKLMCGPFLKFVAHAASFIMFLCLLVLNAADRFGGTSLLPNMTIHDHP
SQLFRMKTTRFTWMEILIISWVIGKIWEECKDIWSQDIREYISEPWNLLDFSILAIFMTS
FVARLMAFWHAYSAQCYVDKHHTDLSSITLPSEIQYFQLARINWMPSDPQLISEGLYAVA
VVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFITVFVAFMVGMFNLYSYYLGA
KHNDAFTTLEESFKTLFWAIFGLSEVKSVVINIDHKFIENIGYVLYGVYNIIMVIVLLNM
LIAMFNSSFQEIEDDSDVEWKFARAKLWFSYFEPGGTLPVPFNLVPSPTSVISLLLGLRE
FLWDVPEGRSRENSNNEMELNKVRQPLLTRMIIQLRQQEDLSVEASLCPTRHQNIINRLI
KRYIVKAQRDKDNDEINEGELKEIKQDISSLRYELLERANHDMYTLAKLISQLGEVMQAR
QRGEKKNELATLS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagcaagttggggccaaactccggcgccaagtcttccggggagccggttac
ctgtatcacgctcagtcctcctcctgcctttccacaacggaggagcttttcttagatgct
gcagaatacggcaacgcttccgaagtgaggcggatgctagaggagctgccggagctcaac
gtcaactgcatgaactacatgggccagaatgcgctgcagctggcggttgccaatgagcat
ttagaggtgactaagctcttactgaggaagaaggacctctccagaataggagatgccttg
ctgttagccatcagcaaaggctacatccgtatagtggacgccatactgagccatcaagcc
tttgcaaacggagagaggctgaccaacagacccagccaggtggacacacacgatgacttc
tttgcctacgacgaggatggcacgcgtttctctcaagacatcactccaatcatcctggcc
tcccagtgccatgagtatgaaatcgtgcacatacttctgatgaagggggcccgcgtggag
cggccccatgactacttctgccagtgcaggacctgcagcgagcagcagaggcatgactct
ttcagccactcacaatcgcgcatcaacgcgtataaatgtctggctagtccggcatatctg
tctctctccaacgaagacccggtgatggcggctctggagctgagcaacgagcttgcagta
ctggccaacattgagaaggagttcaagaatgattacaagaaactatccatgcagtgcaaa
gactttgtggtgggagtcctggacttgtgtcgaaacacagaggaagtgaaggccatctta
aacggggacagtgaatcatgtcaaagctcggagaccttgggcagacagaaccttatcagg
ttaaaacttgcaataaaatatgaagttaaaaagttagggaagctcatgtgtggacctttc
ctgaagtttgtggcccatgcagcctccttcataatgttcctttgcctgctggtcctgaac
gcggcggatcgtttcgggggaacgtcgctgctgcccaacatgaccatccacgatcacccc
tcgcaactgtttcgtatgaagaccacccgcttcacctggatggagattctcatcatatcc
tgggtcatagggaagatctgggaagaatgtaaagatatttggtcgcaggacatccgggaa
tacatctcagaaccctggaaccttcttgactttagtattttggccattttcatgacctct
ttcgttgccagattaatggctttctggcatgcatattctgcccagtgttatgttgacaag
caccacactgacctgtccagcataaccttgccctctgagatacagtacttccagctggcc
cgaatcaactggatgccctctgacccgcagcttatttctgagggcctctacgcagtcgca
gtggtgctcagtttctcccgcattgcatacatcctgcccgccaatgagagcttcgggcca
ttgcagatctctctgggcagaacagtgaaagacatctttaagttcatggtgattttcata
acggttttcgtggctttcatggtgggaatgttcaatctgtactcgtactacctcggagcc
aagcacaacgatgccttcacaacgctcgaagagagttttaaaacgttgttttgggccatc
ttcggcttgtcggaagtgaaatcagtggtcattaacatcgaccataagttcattgagaat
attggctatgttctgtatggagtgtacaacatcatcatggtgatcgtcttgctcaacatg
ctcattgccatgttcaacagctccttccaggaaatagaggacgactctgatgttgagtgg
aagtttgccagagcaaagctttggttctcatactttgagcctggtggcacactgcccgtc
cccttcaacctggtccccagccccacgtctgtcatctccctcttgctggggctcagggag
tttctctgggatgtacctgaaggcagaagccgagaaaattcaaacaatgagatggagctc
aacaaggtgaggcagccgctgctgacacggatgataattcaactgaggcaacaggaagat
ctgagtgtggaagcatcactttgtccaacccgtcaccaaaatataataaaccgcctcatc
aaaagatatatcgtaaaagcccagagagataaagacaatgatgaaattaatgaaggtgaa
ctgaaggagatcaaacaggacatctccagtctccgctatgagctgctggaaagggcgaac
cacgacatgtacacgctggcaaagctcattagccaactgggagaagtcatgcaagctcgc
cagagaggagagaagaagaatgagctcgctacactgtcttga
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