Cyclopterus lumpus (lumpfish): 117742541
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Entry
117742541 CDS
T09199
Symbol
rb1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04110
Cell cycle
clum04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117742541 (rb1)
04218 Cellular senescence
117742541 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117742541 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117742541 (rb1)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117742541 (rb1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117742541 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
HTH_CHD6-9
Motif
Other DBs
NCBI-GeneID:
117742541
NCBI-ProteinID:
XP_034405918
Ensembl:
ENSCLMG00005022772
LinkDB
All DBs
Position
14:complement(15075451..15097139)
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AA seq
913 aa
AA seq
DB search
MPPKKRNSGTAQSKEAKSAESVSADKKESPELSFKKHRDKDAEFVTLCKSLHVTDLVCDR
AWALWKTVQESMDEIADSQKRVWGACLFVSGTDADVACFTVTQVLKAVSLNVKQFVALVW
KLDVNLDTISTKVNSALTRLEKKYDVSLALYQRFEKTCKTIFALASDDQERKTMRSCWTM
FLLAKGRALQMEDDLVISFQLLLCTLELFIKRCPPDLLQPLYKSAISKVQSPPTRTSRRS
QSKAKSKPLEPEVDLQLLKTLCNENDCNAEEVKNVYQTSFSAFLDSLDLSKSPDFPQAKD
LNQQYEEHYLKSRDIDGRLFFDGDETVFAPKVKISHVERTPKKNQPDDDVLIPPQTPIRA
AMTSIQQLRGDLTSSGDQPSTNLATYFKNCTVDPMQAVLSRLETLEQAFSQRFGLAVGPR
CIVLGCQRFKLGVRLYYKIMEAMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMAT
YGESSFKTGGYNHDAAGDPVETDLCFPWILDVVDLPAFDFYKVIESFIKAEPTLSKDIVK
HLETCENLIMERIAWRTDSPLFELLKQEHGGGAADQVETPASFSQPLQHNHTAADLYLSP
MRPGLRVLPPESPATPGSQAPSQPLTQPAGQTPRLPKSNSLSLFYKKLYRLAYSRLQILC
SYLLSSHPELEPIIWTLFQHTLQHEHELMRDRHLDQLMMSAMYAICKVKSVDLRFKTIVT
AYKNMPNTNQETFKHVLITEGHYDSIIVFYNQVFMQKLKTNILQYASTRPPTLSPIPQIP
RSPYKFPNSPLRVPGSNNVYISPLKNSRMSPGIMTPRSRMLVSIGESFGLSNRFQKINQM
VNSSERSFKRTLDLGSAPKPLKRLRFDVDGQDEGDGSKSGGDSTLIQKLAEMSSTRSRMQ
EQKMKEDAESKKE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgaaaaagcgcaactctgggacggcacagagcaaggaggcgaaaagtgccgaa
agtgtctctgcagacaagaaggagagcccagagttatcttttaaaaagcaccgagacaag
gatgctgaatttgtgaccctgtgtaagagccttcatgtgacggacctggtgtgtgatcga
gcctgggcgctgtggaaaactgttcaagagtctatggatgaaatcgccgacagtcagaaa
agggtctggggggcttgtctgtttgtgtcggggacggacgcagatgtcgcctgcttcacc
gtaactcaggttctgaaagcagtcagtctgaatgtaaagcagtttgtggctctggtgtgg
aagttggatgtgaacctagataccataagcaccaaggtgaattcagcactgacgcgactg
gagaagaagtacgatgtgtcgctggctctctaccagcgatttgagaaaacgtgcaagaca
atctttgctttggcttctgatgatcaggaaaggaagaccatgcgaagctgctggacaatg
ttccttttagcgaaaggaagggccctgcagatggaggatgacctcgtcatatcattccag
ttgctgctttgtacgctggagttattcatcaagcgttgccctccagaccttctgcaacct
ctttacaaatcagcaatcagcaaagttcagagccctccgacacgaacatctcgccgcagc
cagagcaaagccaagtccaaacccctggagccagaggtggatttgcagctcctcaaaacc
ttgtgcaacgagaatgactgcaatgcagaagaggtgaagaatgtataccagaccagtttc
tcggctttcctggactcactggatctttcgaaatctccagattttcctcaggcgaaagac
ctcaaccaacaatacgaagagcactatctcaagagtagagacattgatggacggctgttc
ttcgacggagatgagaccgtttttgctccgaaagtcaagatatcccatgtggaaagaacc
ccgaagaagaaccagccagatgacgacgtactcattcctccccagaccccgatcagagct
gccatgacttccattcagcagttgagaggtgacctcacctccagtggcgatcagccatct
acaaacctagctacttattttaaaaattgcaccgtggacccgatgcaggctgtgctgtcg
cgtttggagacactcgaacaggcgttcagccaaaggtttggcctggcagtcggcccgcgc
tgtatagtactcggttgtcagagattcaaactcggtgtcagactgtattacaaaatcatg
gaggctatgctgaaatcggaagagaagcgactgtctgtgcaaaatttcagtaaactcctc
aatgactccacattccacacatcactgttggcgtgcgctttggaggtggtgatggcaacg
tatggagagagcagttttaagactggaggatacaaccatgatgctgctggtgacccagtt
gaaaccgacttgtgtttcccctggatactggatgtggtcgacctccccgcctttgacttc
tacaaagtcatcgagagtttcatcaaggccgagcccactctgagcaaagatatcgtcaaa
cacctggagacctgcgagaacctcatcatggagagaattgcatggaggacggactcgccg
ctgtttgagctgctgaaacaggagcatggaggcggagcagcagatcaggtggagactccg
gccagtttcagccaaccactgcagcacaaccacaccgcggctgacctatacctgtccccc
atgcgtccaggtcttcgtgtcttgcctcctgagtccccggccacgcccggctctcaagct
ccctctcagcctttgacccagcctgccggccagactccacggctcccaaagtccaactcg
ctgagcctcttctacaaaaaattgtaccgcctggcctacagcaggctgcagatactctgc
tcctacctgctctcctcccacccagaactagagccaatcatatggaccctgttccagcac
acgctgcagcatgagcacgagctgatgagagaccgtcacctcgaccagttgatgatgtcg
gccatgtacgccatctgtaaagtaaagagtgtcgatctgcgcttcaagaccattgtcaca
gcgtacaagaacatgcccaacaccaaccaggagacctttaagcacgtgttgatcactgag
ggccactatgactccatcatcgtcttctacaaccaagtgttcatgcagaagctgaaaacc
aacattctgcagtatgcgtcgactcggccacccaccctctctccaatcccacaaatacct
cgaagcccctacaagttccccaattcacctctgcgtgtgcccgggagcaacaacgtgtac
atctcccccctgaaaaactcacgcatgtccccgggtatcatgactcctcgctcccgaatg
ctggtatccatcggtgaatctttcgggttgtccaatcggttccagaagatcaaccagatg
gtcaacagcagcgagcgctcctttaagaggactctggatctcggctcggctccgaagcct
ttgaagaggttacggttcgatgtggacgggcaagatgaaggcgatggcagcaaatctgga
ggagattctacactgatacagaagcttgcagagatgagctccactcggagtcgcatgcag
gagcagaagatgaaggaggatgcggaatcaaagaaggagtaa
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