Cyclopterus lumpus (lumpfish): 117742953
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Entry
117742953 CDS
T09199
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
clum04510
Focal adhesion
clum04540
Gap junction
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117742953
04020 Calcium signaling pathway
117742953
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117742953
04540 Gap junction
117742953
09142 Cell motility
04810 Regulation of actin cytoskeleton
117742953
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clum01001
]
117742953
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clum04090
]
117742953
Enzymes [BR:
clum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117742953
Protein kinases [BR:
clum01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117742953
CD molecules [BR:
clum04090
]
Proteins
117742953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
VEGFR-1-like_Ig-like
Stevor
RIFIN
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
117742953
NCBI-ProteinID:
XP_034406525
LinkDB
All DBs
Position
14:complement(132727..174457)
Genome browser
AA seq
1015 aa
AA seq
DB search
MESSPADMKAPPGRRTGSLNVLHFLLGVFLVLHEGGIGLELQPSTAQVLINSTSNFSVVC
SGWSHVTWRLPDAQVEGVVVENQGSSSILQLFKATWKNSGRYTCEEASAYQSRAVDIFIP
GQGPEEWFIPLGSGVVMKESEEDTIPCVVSDPRLSVSLYERPGRTAVSGATYEPGRGFTG
QLNDTSYVCSATWGGEERESQVYYVFSIVVPKVMEVDMSVSSRVLKQGEVLTVNCTVKDT
EIVFFSWDFPRRQEIEPLTDFLPNRIRSFVNISTVTLADSGVYVCVVQEPMQDRTVKRNV
TVTVLDRGYVYLWPSGETNVSSLLHHTVEFSVEVDGLPLPTVLWTKDNNTVASETTSTDQ
MGSRYVSKLTLVRVQMDQMGSYTATASNEDAVEEVFFHLEVKAPPRITSLSEAVSKGILC
VSEGAPPPTVTWYTCHSTHRCSNLTGGWRSLSAASEGVALQENITQVAERGVTQVRSVLT
LQSHTSVSAVRCEAKNSAGRRTRDLRVLANSLLSQVAVLAAVLVLVIIAVVFLIILILLW
KKKPRYEVCWKVIESVSPDGQQYTYLNPAHLPYNSSWEVPRDNVILGQVLGSGAFGRVVM
ATISGRLPFHSTTKAAVKMVKSSSGAAQSLMSELKVLVLLGPHLNVVNLLGACTRGGPVY
LITEFCCHGDLVNYLQRNKHTFRQRETHTKSYSDGGYMDMTKEDSVQYVAMKELSSADIQ
PPVYKTPYTPADQQETPSLLLSDSPLLSLTDLLSFSYQVSQAMDFLSSRRCVHRDLAARN
VLVSEGKLVKICDFGLARDLVKDQDYIVRGNKFLPVKWMSPESLFHNVYSSQSDVWAYGV
LLWEIFSLGVSPYPDLPLNQDFYSSLQRGYRMSRPEPAPINMYDLMKQCWDEKPEARPSF
TSLVVSMGDMLTDDYKKRYFQLTQNFLDEERSAVIGSRTSRPSASMLLTGSPASQVKVQL
FEAEPEEAGPSHCAALDAVSPQLSESQEVTSSKVRQEADEAPDSPRRHEEEESFL
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggagtctagtccagcggacatgaaggctccccccggaagacgaacaggaagtctgaat
gtgctgcacttcctgttgggtgtgttcctagttcttcatgaagggggcatcggtctggag
ctgcagccttcaaccgctcaagttctgatcaactcaacctctaatttcagtgtggtgtgt
tccgggtggagtcacgtgacgtggcggctacctgacgcccaggtggagggggttgtggtt
gagaatcagggctccagcagcatcctgcagctctttaaggccacctggaagaactctgga
agatacacatgtgaggaggcgtcggcctatcagagcagagcggtggacatattcatacct
gggcaaggtccggaggaatggttcatcccgctgggttccggtgttgtgatgaaggaatcg
gaggaagacaccatcccgtgcgtggtttccgacccacggctcagcgtctcgctgtacgag
cgtcccggcaggacggcggtcagcggagcaacgtacgagccgggacggggcttcacgggg
cagctcaacgacacgtcatacgtgtgctcggccacctgggggggcgaggaaagagagtcc
caggtgtattatgtcttcagcatcgtagtccctaaggtgatggaagtggacatgtctgtc
tccagcagggtgttgaagcagggggaggttctcactgtaaactgcacagtcaaagacacc
gagatagtcttcttctcctgggacttcccccgcagacaggaaatcgagcctctgacggac
tttctgcccaatcggatccgctcctttgtgaacatctccacagtgacgctggcagattcc
ggtgtgtatgtgtgtgtggtgcaggagccgatgcaggatcgaactgtgaagagaaacgtc
acagtaacagtactggatcgaggttacgtttacctgtggccttcaggtgagaccaacgtg
tcgtctctcctccaccacacggtggagttcagtgtggaggtcgacggcctccccctcccc
accgtcctctggaccaaagacaacaacaccgtcgcctcagaaaccacctccacagaccag
atgggaagcaggtatgtgagcaaactgacgctggttcgggttcagatggatcagatggga
agctacacagcaactgcttccaacgaggatgccgttgaggaagtcttcttccacctggag
gtcaaagcgccccccaggatcacgtctctgtcggaggccgtcagtaagggaattctttgt
gtcagtgagggagccccgcccccaactgtcacctggtacacctgtcacagcacacacagg
tgcagtaatctgacgggcggctggaggagtctatcagcggcctcggagggcgtggctctg
caggagaacatcacacaggtggcggagagaggcgtcacccaggtacgcagtgtgttaact
ctgcaaagtcacacctccgtgtcagctgttcgctgtgaagccaaaaactcagccggacga
cgaaccagagacctgcgagtactggccaactctctcctgtctcaggttgcggtcttggca
gcagttctggttctggtcatcattgccgtcgtcttcctcatcatcctcatcctcctctgg
aagaaaaaacctcgttatgaagtctgttggaaggtgattgagtcggtgagccctgacgga
cagcagtacacctacctgaaccccgcccacctgccctacaactccagctgggaagtacca
cgagacaatgtaatactagggcaggtgttgggttcaggtgcctttggtcgtgttgtcatg
gcgaccatctctggtcggcttccctttcattctacaactaaagctgccgtcaagatggtc
aaatccagcagtggggcggctcagtctctgatgtcggagctgaaggttctggttcttctc
ggtcctcacctgaacgttgttaacctgctgggagcgtgcacgaggggaggacctgtctat
ctgatcactgagttctgttgccatggagacctagtgaactacctgcagaggaacaaacac
accttcagacagagagagacacacaccaagagttacagtgatggtggctacatggacatg
actaaagaagacagcgttcagtacgttgccatgaaggagctgagctccgcagacatccaa
cctccggtgtacaagacaccgtacacgccagcagaccagcaggagacgccgtctctcctc
ctcagtgattctcctctcctcagtctcactgacctcctcagcttctcctaccaggtctcc
caggccatggacttcctgtcctcaaggaggtgcgtccatagagacctggcagccaggaac
gttctggtcagtgaggggaagctggttaagatctgtgactttggtctggccagagatctg
gtgaaggaccaggactatatcgtcagaggaaacaaattcctgcctgtgaagtggatgtct
cctgagagtctgttccacaacgtgtacagctctcagagcgatgtctgggcctacggagtt
ttactgtgggagatcttctctcttggtgttagtccgtaccctgacctccctctgaaccag
gacttctactcttccctgcagagaggctacaggatgagtcgccctgagccggctcctatc
aacatgtatgatctgatgaaacagtgttgggacgagaaacctgaggccagaccttctttt
acctcactggtcgtctccatgggcgacatgttgactgacgactacaagaagcgttacttt
cagctcacgcagaacttcctggacgaggagcgttcagctgtcattgggtcccgaacgagt
cgtccatcagcttccatgttgttgacaggaagccccgcctctcaagtgaaagttcaactg
tttgaggctgagccagaggaggccggcccctcccactgcgctgcactggatgcagtcagc
cctcagctgtcagagtcacaggaagtgacatcatcaaaggtcagacaggaagccgacgaa
gctcccgattctccacgccgccatgaggaagaggagagctttctgtga
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