Cyclopterus lumpus (lumpfish): 117743681
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Entry
117743681 CDS
T09199
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3 isoform X1
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04217
Necroptosis
clum04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117743681 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117743681 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117743681 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117743681 (tnfaip3)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117743681 (tnfaip3)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C64
117743681 (tnfaip3)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
117743681 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
117743681
NCBI-ProteinID:
XP_034407298
Ensembl:
ENSCLMG00005004744
LinkDB
All DBs
Position
15:7168951..7179551
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AA seq
837 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPAASSGLMHHLRGMHRYTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCQEVKKMVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALHGVLKETDTGVFRARFQAELLQSQEFTQTGLRYTTMNWEEEWEKIVKMAS
PASGSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
LPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELKVHFLMEKEQQQ
RERLLKDYLLLIEIPVIGLGYDTTRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKELAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQATTGGGI
RIEGVVQTKGGGVQCGVGVIGGSETEVSSRGARGSSPTSSTSGRGVVISSPRSAPPTAPS
LSLYSETHAMKCKTPGCLFTLSVEHDGLCERCFNSRQNLGPPGAGTAAPGVPGPNGGPTV
PHPAQGTGWTQWGGRETETETERCSMCRQEAFRIFNGLCPPCMQRQQPPEREEPQQNNPR
TEALSSAWTQARDTERPCLTLTPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVD
YQTNHHLTPPPAPVQSRHGVEAGFQNASRCRGPGCGAVGKAMLEGYCDKCYVKEQSTRLN
QVAQRTPHSPPLVMRDRAAKPRSSQQSQTQTQTQTQTQTQTQTQCRRSGCSNVSPGCTDL
CPECHTRGQGREAGRRAQAPKEKSKQRCRTQGCDHYANAEKQGYCNECDHFKQIYRG
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctccccaaattcctgtttgtgtccaacctgctgaaggcc
gtgaagatccgtcagcgagtgcccaacgacgtggtgaagccggctgccagcagcggcctc
atgcaccacctgcgtggtatgcaccggtacacgctggagatgattgccatgaaccacttc
ccgcaggccttcagggaggtggtgcaggccgccatcctggaccgagccatgcaggcctca
ttggagcaggagaagaagctcaactggtgtcaggaggtgaagaagatggtgcccttacgt
accaatggagatggcaactgtttgctccacgcggcctctcagtacatgctgggcgttcag
gacacggacctggtgcttcggaaagccctgcatggtgttttaaaagagactgacactggc
gtcttcagagctcgcttccaggcggagctgctccagtcccaggagttcacacagaccgga
ctacgatacaccacaatgaactgggaggaggagtgggaaaagattgtgaagatggcgtct
ccggcctccggtagcaacggcctccagtttgactctctggaggacattcacatcttcgtc
ctctccaacattctccgccgacccatcatcgtcatcgcagaccaggtggtcaggagtatg
aaatctggctcctccatctcgcctctgaatgtgggtgggatttatctgccactacactgg
ctgcccacagagtgctacaaatacccaatcgtgctcggctacgactcccagcactttgca
cccctcatcaccattaaagacagcggcccagagatccgagcagtaccgctgatcaaccca
ggacgagggggctttgaggagctgaaggttcacttcctgatggagaaagaacagcaacag
agagagaggcttctcaaggactacctgctgctgatagagatccccgtcataggcttgggc
tacgacaccactcggatcatcaatgctgcacggctggatgagggcaacctccctgaagac
atgaacctgatggaggactacctgcagcttgtcaaccacgagtaccagcgctggcaggag
gacaaggagctggcgtgggccgcccagccgcagcgcccaccgcccttctccgtctcccag
ctctccctcatcgagatccgttgcgccacaccgcgatgcaccttctacgtctctgtggac
acgcagcctcattgccatgaatgctttgagaagcgacaggccaccaccggtggaggaata
aggattgaaggggtcgtgcagaccaaggggggaggggtacaatgtggggtgggagtgata
gggggatcagagactgaggtgagctccagaggagcccgaggcagcagccccacatcctcc
acgtctgggagaggggtggtgatatccagcccccgctcagcacccccaaccgctcccagc
ctcagcctgtatagtgaaactcatgccatgaagtgcaagacacccggctgcctctttacc
cttagcgtggagcatgatggactttgcgagcgctgcttcaactccaggcagaaccttgga
ccccctggagctggaacagctgctccaggagtcccaggccccaatggggggcctacagtc
ccccacccggcccagggcaccggctggacccagtggggcggccgcgagacagagacagag
acagagcgatgcagcatgtgcagacaggaggcgttcaggatattcaatggcctgtgtcca
ccctgcatgcagagacagcagcctccagagagggaagagccgcagcagaacaaccccagg
actgaggccttgtcttcagcttggacccaggctagggacactgagaggccgtgcctcacc
ctaaccccggggcacacctcagcctggcaagcccctctggcccggccttgtaaaagatcc
ggctgccagttctttgggacgccggagaagttgggtttctgcactatttgctacgtagac
tatcagaccaaccaccacctgacccctccccccgccccggtccagagccggcatggtgtg
gaggcaggcttccagaacgcctcccggtgtcgagggcctgggtgtggtgcagttggcaag
gcaatgctggagggctactgcgacaagtgctacgtcaaagagcaaagcacacggctcaac
caagtggcacaacgcacaccacactcgcctcctctggtcatgcgtgaccgagcagccaaa
cccagatcttcacagcaatcccagacccagacccagacccagacccagactcagacccag
acccagactcagtgccgacggagtggctgcagtaatgtgtccccgggttgcacagacctc
tgccccgagtgccacacacgcggccagggcagagaggcgggcagacgggcgcaggcgcct
aaagaaaagtccaagcagcggtgccggacgcagggctgcgaccactacgccaacgcagag
aaacagggctactgcaacgagtgtgaccacttcaaacagatttaccgcggctga
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