Cyclopterus lumpus (lumpfish): 117744113
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Entry
117744113 CDS
T09199
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein isoform X1
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117744113
Membrane trafficking [BR:
clum04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
117744113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
117744113
NCBI-ProteinID:
XP_034408119
Ensembl:
ENSCLMG00005005933
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All DBs
Position
15:complement(12972864..12977907)
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AA seq
945 aa
AA seq
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MARLVLEQLSDFGDFTGGEDVLRLTSHENTNSLSNVRLSPEGRHVHVIFREPQVGLVTLD
KFERPHLVQNQKKLDLRSTRAVPIVDVLYLDHRDSSRDTAAVAVVYENGKAEFWKFQECK
AGWHLLQSSDLCNSPRATVVSVCAWSNLLIWCEERPPSESTPALSSTRNKLRYCVCRRDF
EVSEGAVSLGGVKIALHNNPKFTVVSSGEFVHLLPDLKGKPPMTVSKCFLSWSPLQDSFT
VGTTCKSTPLKKLSAQESDLKRLLTDCLGYLSTLEPPEIYDFSPTACGGLLLLLSTGWVC
LLQKDGMLRQVYKLAGNCLVTRGTHTSLCMYQDVIAVVIGQNLHLIDVNCGRELEKITLK
NEGVLYVNCAERCAPHLLLETGLFVVVNRETDSRDCGSKRKPSCLSAVESNHPEALLVEA
VFEEACKYYQQRSLSSTQLTVDTLKKGGRFQAPISLASILRNYLSTGLRQKGTEPSQNGG
VGCTAGQDKLMVSLESELKALVSLEEVKGSLVRGNTKEVEAVCESLVEKEVARLLSVSEL
DREALLYLNSLFSIFPCQLWRAAQAALQLHHNGDGSLSSRAPPEVWKTVLSPATTPSTPT
CLSLTNGGPKHNYSLKGDHSTNYKHTQSTSPAALPVFELLCHSVFSFQPSWLPRFLELAQ
QQQGSAGLGLSLASSSWGFSSGRGGEGGENNVPLYKRALCVLSSLTPDRDGCQDLEVELL
LVSGRPNAILQALRILMAKQQWEWVTQVAQKFCKQSPLLNKEIFTTLLYEVIQHRDLDPY
LDLLWALCPEDLTVTTILNLVLKNLPSPNTVPSSSSSFSTKTSMSPAPFADSHSSQLTIG
LLKPLLRKVLQRETKPSQRYADILQSPSFPPPAPPRQPTEQPRRHLVLFAPSEPHRTFQT
LYPVSDSQFDFKFNCGGNSVSIGVWVWYVVTNMDVLLASGHVRLP
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttggtgttggagcaactgtcagatttcggggactttactggcggtgaagac
gtcctcagactgacgagtcacgagaacacaaacagcctgtcaaacgtccgcctgagccca
gaaggacgtcacgtccatgtcatctttcgcgagcctcaggtcggtctcgtgactctggac
aagtttgaaagaccccatcttgtccagaaccagaagaagctggatttgcggtcgacgcga
gccgtgcccatcgtggacgtgttgtatttggaccatcgtgacagcagcagagacacggcg
gccgtggcggtcgtttatgagaatgggaaagcggagttttggaaattccaggagtgcaaa
gcaggctggcatctcctgcaatcttcagatctgtgcaacagcccccgagcaacagtggtg
tccgtgtgcgcatggtccaacctcctcatctggtgtgaggagaggccgccctcagagagc
acccctgctctcagctccacaaggaataagttgagatactgtgtttgcagacgtgacttc
gaggtgtctgagggggctgtgagcctgggaggagtgaaaatcgccctccacaacaatcct
aaattcacggtggtcagctccggtgaatttgtacatcttcttcctgatttgaaagggaag
ccgccgatgaccgtctccaaatgttttctctcctggtcccctctccaagattccttcaca
gtcggcaccacatgcaaaagcacacccctcaaaaagctttcagctcaagagtctgactta
aaaaggttgctgacggactgtttgggatatttatcaacacttgaaccacctgagatctac
gacttctctcccacggcctgtggaggcctgctgctgctgctcagcacagggtgggtgtgt
cttctgcagaaagatgggatgctgcggcaggtatacaagctggcaggcaactgcttggtc
acgcgtggtactcacacgagcctctgcatgtatcaggacgtcatagcggtggtgatcggg
caaaacctgcatctgatagacgtgaactgtggcagagagctggaaaagatcacgctgaag
aacgagggggtattgtatgtaaattgtgctgaaagatgtgcacctcacctgctcttagaa
accggtctttttgtggttgtgaacagggagacagactccagagattgcggctcaaagcgg
aagccgtcttgtctcagtgcagtggagagtaatcatccagaagccctgctggtagaggct
gtctttgaggaggcctgtaaatactaccagcagaggagcctgagcagcacccagctcact
gtggacacgctgaagaaaggaggtaggttccaggcgcccatctctttagcgtccatcctc
aggaactacctcagcacagggctgaggcagaaaggaacagagccgtcccagaatggagga
gtcggatgtacagcaggacaagacaagctcatggtttctctggagtctgagctcaaggct
ctggtctctctggaggaggtgaaggggagtttagtgagggggaataccaaagaggtggag
gcagtgtgcgagagtctcgttgagaaagaagttgccaggctgctctcggtctcagaactg
gatagagaggctctgctttacctcaactccctcttcagcatcttcccctgccagttgtgg
agagcagcgcaggctgcccttcagctacaccacaacggggacggctctctgtccagcagg
gctcccccagaagtgtggaaaactgtcctcagtcctgctacgacacccagcaccccgacc
tgcctctctttgacaaacggtgggccaaaacacaattatagcctcaaaggtgatcacagc
accaactacaaacacacacagtccacttctccagctgccctgcctgtgtttgaactcctc
tgccactcagtgttctccttccagcccagctggttgcccaggttccttgagctcgcccag
cagcagcagggctccgccggcctgggcctcagcctggcttcttcctcctggggcttctcc
agtgggaggggaggggagggcggggagaacaatgtgccgctctacaaacgagccctgtgc
gtcctgtccagcctgacgccagacagagatggatgccaggacttagaggtggagctgctg
ctggtcagtgggcgtcctaatgccatcctgcaggcgttgaggatcctcatggccaagcag
cagtgggagtgggtcacccaggtggcccagaagttctgcaaacagagtccgctgctcaac
aaggagattttcaccactctgctgtatgaggtgattcagcacagagacctggacccctat
ttggacctgctgtgggcgctgtgtccagaagacctcacggtcaccaccattctcaacttg
gtgctgaaaaacctcccttcccctaacaccgtgccctcctcctcctcctccttctccact
aaaacctccatgtcccctgctccctttgcagactcccacagcagccagttgaccatcgga
ctgctgaaacctctcctgagaaaagtccttcagagggagaccaagcctagccagcgctat
gcagacatcctccagtcaccatcattcccccctcctgcacctcctcgccagcccacagag
cagcccagacgccatcttgtcctctttgctccctcggagcctcacaggacattccagact
ttatacccagtaagtgactcacagtttgactttaaattcaattgtggaggtaattcagtt
agtattggagtgtgggtttggtatgttgtgactaacatggatgtgctgcttgcatcaggt
catgtacgtcttccttaa
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