Cyclopterus lumpus (lumpfish): 117744147
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Entry
117744147 CDS
T09199
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117744147 (ret)
04020 Calcium signaling pathway
117744147 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clum01001
]
117744147 (ret)
Enzymes [BR:
clum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117744147 (ret)
Protein kinases [BR:
clum01001
]
Receptor tyrosine kinases (RTK)
RET family
117744147 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
RET_CRD
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
ATG101
Motif
Other DBs
NCBI-GeneID:
117744147
NCBI-ProteinID:
XP_034408167
Ensembl:
ENSCLMG00005006182
LinkDB
All DBs
Position
15:complement(21518131..21534620)
Genome browser
AA seq
1105 aa
AA seq
DB search
MGSSCGFSRGNIVVLLLLLEGATGLYFPQNDYFETVYVGQLAGTPILQLHAMLDSASERP
HFYLCPTAGRRSDYSSWFNLDINTGILSLNKTLEESDFALLYKHSWSVQKLLLHAMVKPT
FTRKLPCIRNSRVTLDFVNATMPQCAQTDLKELCFRHRDTSNPHVMENRFPGALRQLRRL
TRLNVCPNYTITYNVESDAPAPFAVNENTMELLVTAPLDREESECYRLLLVCTVRTETLI
TKVETSLDVFVNDEDDNGPYVNGTDTADVIIGFNRTKGGSFGALFVFDRDLTPIYPIDQN
HNKYVGTLLNNDPWVMKTFGIKGTFSEKKAALGGIRETVHDYQLVLKRNLDVTENRTLQL
DYLVNDTTYPGLEGTVLLHFNVTILPVHIRFANITHMFSVTRQASLYAQVGTVCVENCQQ
FAGFGVTYRLEVPDKNVSADAQSCYAAIGVTQASDQMWGLLYVSDSEALRRPECQDLQYL
VVAQEERMQLEASTQIHILLEGEANKAGQERQQFSSCSESRQRGQCESVRGLGVTTGRCQ
WRQGTEKGISENYSTCSPDLRTCPDSFCDAVESKNASICPQDCTKEPVTGGHERGLRNGI
QAGYGTCYCYSDSCFCEKDDIEEAICEDMCKTIIATALLLSFIVSILLSSYFIHRYHKNS
PKPPIASAEMTFRRPAQGYPISFPANLRRGSQDSIETDTFKIPEDPKWEFPRKNLVLGKS
LGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNHPHVIK
MYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGRDANRNSSYLENPDDRALTMG
DLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRS
KGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYR
MERPENCSEEMYNLMLRCWKQEADKRQTFSEISKELEKMMVKSRDYLDLAASTPADALLY
DDALSEEDTPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWPEKSPVPLNRHDATNPVFTR
YANDSVYANWMALPSPAKAVDKLDS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaagttgtggtttctctcggggaaacatcgtcgtgctgctgctgctgctggaa
ggagcgacagggctgtacttccctcagaatgactactttgagacggtgtacgttggccag
ctggcaggaacgccgatcctccagctccacgccatgctggacagcgcctctgagcggccg
catttctacctgtgcccgacagctggcagacgttcagactacagctcctggttcaacctg
gacatcaacactggaatactgtccttgaacaaaaccctggaggagagcgacttcgccttg
ctatataaacactcgtggtcggtgcagaagttgctcctgcacgccatggtgaagcccacc
ttcaccaggaagctcccgtgcatcagaaactctcgggtcaccctggactttgtgaacgcc
acgatgcctcagtgtgctcagacggatttgaaggagctgtgcttccgtcacagagacacc
tccaacccgcacgtcatggagaaccggttccccggggccctgcggcaactcaggcgtctc
accagactcaacgtctgccccaactacaccatcacttacaatgtggaatcagatgctccg
gcaccatttgctgtcaatgagaacaccatggagctgttggtgacggctccgctggaccgg
gaggagagtgaatgctaccgactcctgctggtttgcacagtccggacggaaacgctcatc
accaaggtggaaacgtccctggatgtctttgtcaacgatgaggatgacaatgggccgtac
gtgaatggaacagacacagcagatgtgatcatcggcttcaaccggacaaagggtggctcc
tttggggctttgtttgtcttcgacagggatttaacccccatctaccccatagaccagaat
cacaataagtatgtggggaccctgctcaataatgacccatgggtaatgaaaacatttggc
ataaaaggcaccttcagtgaaaagaaagctgctcttggaggaattcgagagaccgtccac
gactaccagctcgtcctgaagaggaacctggatgtgactgaaaatcgcaccctgcagctt
gactacctggtcaacgacaccacctaccctggtctggaggggacagtgttgctgcacttc
aacgtcaccatcttacccgtccacatccgcttcgccaacattacacatatgttctcagtg
acacggcaagcttctttatacgctcaggtcggcacggtctgtgtggaaaactgccaacag
ttcgccggcttcggggtcacataccggctcgaggtgccagataagaacgtgtctgccgac
gcgcagtcctgctatgcagccatcggcgtcacccaggcctcggaccagatgtggggactg
ctctacgtgagcgactcggaggcgctgcgcaggcccgagtgccaggacctgcagtacctt
gttgttgctcaggaggagcgcatgcagctggaggccagcacgcagatacacatcctacta
gagggtgaagcgaacaaggccggccaggagaggcagcagttctcatcctgttcagaaagc
agacagcgaggacaatgtgagtctgtccgaggcctgggggtaacaaccggtagatgccag
tggaggcaaggcactgagaaaggaatttctgaaaattactcaacctgctcccccgacctg
cggacatgtccagatagcttttgtgatgcggttgaaagcaaaaatgcgtcaatatgtcca
caagactgtacaaaggaacctgttaccggaggtcatgaacgaggcttgaggaacgggatc
caggctggatatggaacctgctactgctactctgacagttgcttttgtgagaaggatgat
attgaggaggcgatatgtgaagacatgtgtaagaccatcatcgccacggctctgctcctc
tccttcatcgtctccatcctcctgtcctcatactttatccaccggtaccacaagaactcg
cctaagcccccgatcgcctctgccgagatgactttccgccggccggctcagggttacccc
atcagcttccctgctaaccttcgtcggggctcgcaggattccatcgagaccgacaccttt
aaaataccagaggatcctaagtgggagtttcctcgtaaaaaccttgtacttggcaagtct
ttgggagaaggagagtttgggaaagttgtcaaggcaacagcattcaggctgaagggaaaa
gctggttacaccactgtggctgtgaaaatgcttaaagaaaacgcctctcacagtgagctg
cgtgacctgctgtcagaattcactttgctgaagcaggtcaaccatccgcacgtcataaag
atgtatggagcgtgcagtcaggacggtccattgtatctgatcgtggagtatgccaagtac
gggtcactccgcaacttcctgcgcgagagtcggaaagttggcccgagctacatgggaagg
gacgccaaccgaaactccagttacctggagaacccggacgacagggcgctcaccatgggc
gacctgatctcctttgcgtggcagatctccagaggcatgcaatacttggcggaaatgaag
cttgttcacagggaccttgcagcacgaaatgttctcgtcgctgaagggcgaaagatgaag
atctcagactttggcctctccagagacgtgtacgaagaggactcgtatgtcaagaggagc
aagggccgtatacccgttaagtggatggcaatagagtccttgtttgatcacatttacaca
acacaaagtgacgtctggtccttcggtgtgctgttatgggagatagtgacactgggagga
aatccatacccaggtatcgctcctgaacgcctctttaacctcctcaagactggttacagg
atggagagaccagagaactgctcggaggaaatgtacaacctcatgcttcgatgctggaaa
caagaagcagacaagaggcagacgttctcagaaatcagcaaagaactggagaagatgatg
gtgaaaagtcgggattacctggacctggcggcgtccacgccagccgacgccctgctgtac
gacgacgccctctctgaagaggacacgccactagtggactgtaataacgcccctctccct
cgaaccctcccctccacatggattgaaaacaagctctatggcatgtcataccccaactgg
cctgagaagagcccggtaccgctcaacagacatgatgccactaatccagtctttacaaga
tatgccaatgatagtgtttatgcaaactggatggctttgccttcacccgcaaaagctgtg
gacaagctcgatagctaa
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