Cyclopterus lumpus (lumpfish): 117745125
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Entry
117745125 CDS
T09199
Symbol
tlr18
Name
(RefSeq) toll-like receptor 18 isoform X1
KO
K10159
toll-like receptor 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04145
Phagosome
clum04620
Toll-like receptor signaling pathway
clum05132
Salmonella infection
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117745125 (tlr18)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117745125 (tlr18)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117745125 (tlr18)
09171 Infectious disease: bacterial
05132 Salmonella infection
117745125 (tlr18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117745125 (tlr18)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117745125 (tlr18)
04054 Pattern recognition receptors [BR:
clum04054
]
117745125 (tlr18)
04090 CD molecules [BR:
clum04090
]
117745125 (tlr18)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117745125 (tlr18)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Phagocytosis
Toll-like receptors
117745125 (tlr18)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of breast milk
117745125 (tlr18)
Pattern recognition receptors [BR:
clum04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117745125 (tlr18)
CD molecules [BR:
clum04090
]
Proteins
117745125 (tlr18)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Hyaluronan
Cell surface receptors
117745125 (tlr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
117745125
NCBI-ProteinID:
XP_034409098
Ensembl:
ENSCLMG00005007255
LinkDB
All DBs
Position
16:complement(2405126..2416371)
Genome browser
AA seq
885 aa
AA seq
DB search
MPTCNLSFSYLFQVCLMIWKLLHFSALLIGALTSPTPTPSSADATGGPCRLYDGGRAADC
QGRQLDGIPWRHLPSTLEVIDLSSNKLQAVGADDFLRLPRLRVLRLRYNNISRIDDDAFR
NNARLEHLDIFNNSLQDIPAAALTPLLNLRELHMSNNLYRRATLAEGFSKFVKLQVLSMG
GPLVMGLKKEDFQPLKNISLQGFAIKCSNNLSYYEPGSLEVIQTKQMGFDMAVDQRPDAL
PHMLRDLANKTFSVIQFRNLFEFTYYLEEEDLFQSLREITAQKLIFYRGKFNENLLRMTL
MNLQVTPIKRLRLQYIDFARSPTFVDNGAGSSITDLALDKLDLWYISNPDVLRFDWRFTW
FNKIKNLSIRHVYFNFVPCDAWVEMKGVTFLDVSNNRLENKFVFNRRCDYKDAVPNLHTL
KMSSNELTSLKVLSALTRDFRQLQVLDVSDNKLGAVDSGRDCVWQKNITRFIAHHNPLVS
EALGCLPTTVHHLDLSHCELDQLDVTYFGRATELKELLLSGNKIKFIPSSWRSPSLQSLA
LDSNSFGLISSHSFQDMPRLSHLRAGNNPYHCICELRAFIRDTVSKSKVNLTDWPWNYRC
YHPEAFRNTMISRFIPGPMECDFRIVIGISVATTAAVILILMLICYMLDLPWYTKATYQI
VRAKYRAHKERAAGELGTFTYHAFISYSHSDADWVRDQLLPRLESNGNSYHLCIHERDFM
PGRWIIDNIIDNIECSRKVIFVLSHHFVNSEWCNYELYFAQQRAVGKTFGDVILVVKEPM
DPSSLPSKYCKLKKMLSNKTYLEWPQQVSQQTFFWAQLRGVLGKPSMTRRRALRTPSERS
VAVIGPPVEELAIPNADREAEPKNGIVKWNNNEVSNMRQIPMVTF
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgccaacatgtaatctctccttttcttacctttttcaagtctgtctgatgatttggaaa
ttgcttcattttagtgccctccttattggggcacttacatccccgactccaactccatcc
tcagccgacgccaccggaggaccgtgtcgcctctacgacggcggtcgcgcagcagactgt
cagggcagacagctggacggcatcccgtggagacaccttccatccacactggaagtcata
gatctctcctccaacaaacttcaagccgtcggcgccgacgacttcctgcgcctccctcgg
cttcgggtccttcggctgcggtacaacaacatctcacgcatcgacgacgacgcctttaga
aacaacgcacgactggagcatctcgacatcttcaacaactccctgcaggacattcctgcc
gcggctctgactcctcttttgaatctgagagagctccacatgtccaataacctttaccga
cgtgcgactttagcggaaggcttctccaaatttgtcaaactccaggttttgtccatgggc
ggccctctggtgatgggtctaaagaaagaagactttcagcccctgaagaacatcagcttg
caaggtttcgctatcaaatgctccaacaatctaagttactacgagcccgggagtctagaa
gtcatccaaaccaagcagatgggcttcgacatggccgtagaccaacggccggacgctctc
cctcacatgctgcgtgacctcgccaacaagaccttcagcgtcatccaattccgcaacctt
tttgagttcacgtactacctggaagaggaggaccttttccagagtttaagagagatcacg
gcccagaagctcatcttctacagaggcaaattcaatgagaacctcctcaggatgactttg
atgaacttacaagtcacccccatcaaaaggttgagacttcagtacatcgactttgcccgt
tcacccacgtttgttgacaacggggccggttccagcatcacggacctggctctggataag
ttggatctttggtacatcagcaacccagatgtgctgcggttcgactggcgcttcacctgg
ttcaacaaaattaagaatctgtctattcggcacgtgtacttcaatttcgtgccctgcgac
gcctgggtcgagatgaaaggcgtgacgtttctggacgtctccaacaatcgtctggagaac
aagttcgtcttcaaccggcggtgcgattacaaggacgccgtgccgaatctgcacaccctc
aaaatgagctccaacgagttgaccagcctgaaggtcttgtcggctctgacgagagatttc
cggcagctgcaggtgttggatgtgagcgacaacaagctgggagccgtcgacagcggtcga
gactgcgtctggcaaaagaacatcactcggttcatcgctcaccacaacccgttggtgagc
gaagccctcggatgtctgcccaccacggtgcaccacttggatctgtcccactgcgaactc
gaccagctggacgtgacgtacttcgggagagccaccgagctaaaagagctcctgctgagt
gggaataaaatcaagttcatcccgtcctcgtggcgaagtccgtcgctgcagtcgctggct
ctggacagcaattcgttcggtctcattagcagccattccttccaggacatgcctcggctg
tctcacctgagggcggggaacaatccctaccactgcatctgtgagctccgcgctttcatc
cgggacaccgtgtccaaatcgaaggttaacctcaccgactggccttggaactacaggtgt
taccacccggaggccttccgcaacacgatgatatccagattcatccccggtccgatggag
tgtgactttagaatagtcatcggcatctctgtcgccaccacggcggcggtgatcttgata
ttgatgcttatatgctatatgcttgacctcccgtggtacacgaaagccacgtatcagatc
gtcagggccaaatacagagcgcacaaggaaagagcggcgggggagctaggcacttttact
tatcacgccttcatatcgtacagccactctgatgcagactgggtgagggaccagctcctg
cctcgtttggagagtaacgggaactcctatcacctgtgtattcacgagagggacttcatg
ccaggaaggtggatcatcgataacatcattgacaacattgaatgcagtcggaaggtgata
ttcgttctctcccatcacttcgtcaacagcgagtggtgcaactacgagctgtacttcgct
cagcagagagcagtggggaagaccttcggcgacgtcatcctcgtggtgaaggagcccatg
gaccccagctccttgcccagcaagtactgcaagctgaagaagatgctgagcaacaagacg
tacctggagtggccccagcaggtcagccagcagacctttttctgggcgcagctgagaggc
gtcctgggcaagccatcaatgacccggaggagggcactcagaacgccatctgagcgaagc
gtcgccgtgatcgggccccccgtggaggaactcgcgataccaaacgcggacagagaagca
gaaccaaagaatgggattgttaaatggaataacaacgaggtgtcgaatatgagacaaatc
cccatggttaccttttga
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