Cyclopterus lumpus (lumpfish): 117745225
Help
Entry
117745225 CDS
T09199
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00310
Lysine degradation
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117745225 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117745225 (setdb1b)
Enzymes [BR:
clum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
117745225 (setdb1b)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117745225 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117745225 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
Tudor_5
DUF5604
SET
MBD
Pre-SET
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
117745225
NCBI-ProteinID:
XP_034409283
Ensembl:
ENSCLMG00005010098
LinkDB
All DBs
Position
16:11272240..11285754
Genome browser
AA seq
1341 aa
AA seq
DB search
MQAGRMDITDRMEVEGWDSNMEEELGISLDELKKWIDDAVEKSEMVQKKKAQLTELKEWV
EQKEEEEARTGGLLNDTNKSILECEKLVKATYYKNGLVYQESSSEEEGGVGDFLSSEVIE
IDDDDDDDVIAVGCLVPPKKTGTPGKDPALNEASTALQKTSQQVQKLVQMVSKPSTGAPL
LRSPSKPPSQSGSHASVPAVFVSQVQSQSMTQPNPNVTEDELKVGMMILGKKRTKTWHRG
ALVAISPVGNSIFKYKVKFDKGKSLLSGNHVAFEYNPTLEILYVGARVVAKYKDGNLVWL
YAGIVAEMPNNKNRMRFLIFFDDGYASYVTLPDLHPVCRPLKRTWEDIEDASCRDFIEEY
ITAYPSRPMVLLKVGQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLE
PMFNLKMTTANTQEKKLAGQQRTRPNMGALRSKGPVVQYTSDGHVGASPAKTQQGSPSQP
SQTPQLQRPLQRPPPLQTPQILQIQQIQQPQQLQQPQQIHQIQQPQQIHQIQQMQQMQQM
QQIQQPQLIQQIQQPQQPQQPQQPQQPQQPQQLQQPQQIQQIHQIQQIHQIQQIQQMIQP
SQPPRVDNKHQMAKKSTSAFVPGVGGTHASKIMMQSLSPSPSDLTSARILSVQSTASPAF
TQSYQRLPTLAVATPPVAHTMATVPHQPSYRAPTDRIFYLAHTCQLACLNRVRPAKSDMH
RGKNPLLTPLLYDFRRMTGRRKVNRKMSFHVIYKAPCGLCLRNMAEIQHYLFQTRCDFIF
LEMFCLDPYVLVDRPFQPQRPFYYIPDITSGKEDIPLSCVNEIDSTPPPKVAYSKERIPE
DGVYINTSPDFLVGCDCTDGCRDKSKCSCHQLTLQATGCTPGAQINPNAGFSHKRLEECL
PTGIYECNKRCKCCSQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYAG
KILTDDFADREGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDVSRIKIQPS
ALVSAHPIGRQPKKCESKSKAQNPSSSGDSNEDDDKDSKSEEESDSSDDTFVKDNYFSSS
SVWRSYTTRGQVKGNKEGSQDSKDGLSASARGTDDDKPPSMPEETGKSKVASWLTSQGLK
KESGDGKSQVKSEPGKKQDVMTLSDSDEVQTISSGSDDNKEREKVTLGVTKKQVAVKSTR
GIALKSGHGMMVKTGTPGGGGGPGGQAGKTGQQGQTGGGGDYAPKNTRLFFDGEESCYII
DAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVG
SVEGKVLLCCCGSTECRGRLL
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaggcaggatggacatcaccgatagaatggaagtggagggctgggactctaac
atggaggaagagctgggcatttctctggatgagctgaagaagtggattgatgatgcagtg
gagaagagtgagatggtgcagaagaaaaaggctcaactgacagagcttaaggaatgggtg
gaacagaaagaagaagaggaggcgaggacaggaggtcttctcaacgataccaacaagtcc
atattagagtgtgagaagctcgtgaaggcaacttactataagaacggtcttgtttaccaa
gagagcagctcagaggaggaggggggcgtaggagacttcctgtcctctgaggtcatcgag
atagacgacgatgatgacgatgatgttattgctgttggttgtctggttcctccaaagaag
actggcactcctggcaaagatccagcgttaaatgaggcctccacagcactacagaaaaca
tcccagcaggtgcagaagttagtccaaatggtcagcaagccatcaacaggtgctccattg
cttcgatcgccatcaaagcctccatcacagtcaggtagtcatgcttcagtgccggccgtg
tttgtatcccaggtccagtctcagtccatgacccagccgaacccaaacgtgacagaagat
gagcttaaagtcgggatgatgattttgggaaagaaacgcaccaagacctggcacagaggt
gccctcgttgccatcagccctgtcgggaacagtatattcaagtataaagttaagtttgat
aaaggaaagagtctgctgtctggaaatcatgtggcttttgagtataaccccaccctggag
atcctgtatgtcggggctcgtgttgtcgccaagtacaaggacggcaacctggtgtggctc
tatgctggaatcgtagcagagatgcccaacaacaagaaccgcatgaggtttttgatcttc
tttgatgatggctatgcttcatatgtgacactacctgacctccacccagtttgcagacca
ttaaagcgtacctgggaggacatcgaggatgcatcgtgtcgcgacttcattgaggagtac
atcactgcatatcccagcaggcctatggtgctcctcaaggttggacagatcatcaagaca
gagtgggagggaacctggtggaagagcaaggtggaagaggtggatggaagcttggtcaag
atcctctttttggatgacaagaggagtgagtggatttatagaggctctaccaggttggag
ccaatgttcaacctgaagatgaccactgccaacacccaggagaagaagctggctggccag
cagaggacacgacctaacatgggggcgttgaggagtaaaggtccagtagttcaatacacc
agtgatgggcatgttggagcctctcctgccaaaacgcagcaaggctcacccagccagcca
tcacagacaccacaactacagcgtcctctgcagcgtcctccgcccctacagaccccacag
atccttcaaatccaacagatccaacagccccaacagctccaacagccccaacagatccat
caaatccaacagccccaacagatccatcaaatccaacagatgcaacagatgcaacagatg
caacagatccaacagccccaactgatccaacagatccaacagccccaacagccccaacag
ccccaacagccccaacagccccaacagccccaacagctccaacagccccaacagatccag
cagatccatcaaatccagcagatccatcaaatccagcagatccaacagatgattcagcct
tcacagcctccacgtgttgacaataaacatcagatggcaaagaagagtacttctgccttt
gtcccaggggtgggaggcactcatgcctcgaaaatcatgatgcagtctctttctcccagt
cccagtgacctcactagtgcaagaattctgagtgtccaaagtactgcttcacctgctttc
acacagtcgtatcaaagactgcccactctggctgtcgcaacccctcctgtggcccacacg
atggccaccgtcccacatcagccctcataccgtgccccgacggaccgcatcttctacctt
gcacacacttgtcagctagcgtgtctgaatcgtgtccgacctgcaaagtcagacatgcac
cgaggaaagaaccccctcctcacaccgttactgtacgatttcagacgcatgacaggaaga
cgaaaagtcaaccgcaagatgtccttccacgtgatctacaaggctccgtgtggtctttgc
ctgcgcaacatggcagagatccagcactacctcttccagacacgctgtgactttatattc
ttagagatgttctgtctcgacccctatgtgctcgtggaccgtccatttcagccgcagagg
ccgttctattacattcccgacatcacgagtggaaaagaggacatcccgctctcctgcgtc
aacgagattgattccaccccgcctcctaaagtagcttacagtaaagagcgtattcctgaa
gatggagtatacatcaacaccagtccagacttcctggttggatgcgactgcacagacggc
tgtcgcgacaagtccaagtgctcttgccaccagctgacccttcaggctacaggttgtaca
ccaggggcacagatcaatccaaatgctggtttttcgcacaaacgattagaggagtgcctc
ccaacagggatctacgagtgtaacaagcggtgcaaatgctgtagtcagatgtgcaccaac
cggttggtgcaacatggcctgcaggtgcgcctccagctcttcaagacccagaacaaaggc
tggggcatccgctgtctggatgacgtggccaagggctcttttgtctgcatctatgctggt
aaaatcttgaccgacgactttgccgacagagaaggtctagagatgggcgacgagtatttc
gccaatctggaccacatagagagtgtggagaacttcaaagagggctacgagagcgaggct
cactgttcggacagcgagggcagcggcgtggacgtgtcgagaataaaaatccaaccatct
gctttagtatcagctcaccctattgggagacagcccaaaaagtgtgagtccaagtccaaa
gcccaaaacccaagctcatcaggggacagcaacgaagacgacgacaaggattcaaagagc
gaagaggaaagtgacagttccgatgacacgtttgtgaaggacaactatttcagctccagc
tctgtgtggaggagttacaccacacgtggtcaggtcaagggcaacaaggaagggagtcaa
gacagtaaagatggattgagcgcgtcagccagaggaactgatgacgataagccgccgtcc
atgccagaagagacgggcaaaagcaaagtggcttcctggctcaccagccaggggctgaag
aaggaatctggagacggcaagagtcaagtgaagtccgaaccggggaagaagcaggacgtg
atgactctctctgacagcgatgaggttcagaccatcagctctggatctgatgacaacaag
gagagagaaaaagttaccctgggtgtgactaagaagcaggtagcagtgaaatcaacgcgt
ggcatcgctctcaagagcggccacgggatgatggtgaaaacgggtacacctggaggcggg
ggagggccaggaggccaggccggaaaaacaggacagcagggtcagaccggaggaggtggg
gattacgctcccaaaaacacccgcctgttctttgacggtgaagagtcctgctacatcatt
gatgccaagttggaaggaaaccttggacgttacctcaatcacagctgtagtccgaacctc
ttcgtccagaatgtgtttgtggacacacacgacttgaggtttccctgggtggcgttcttt
gccagcaagcggatccgtgccggcacagagctgacctgggactacaactacgaggtgggc
agcgtggaggggaaggtgctgctctgctgctgcgggtccacggagtgcagaggaagactg
ctgtga
DBGET
integrated database retrieval system
