Cyclopterus lumpus (lumpfish): 117745377
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Entry
117745377 CDS
T09199
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B-like
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117745377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
clum04050
]
117745377
Cytokine receptors [BR:
clum04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117745377
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
117745377
NCBI-ProteinID:
XP_034409553
Ensembl:
ENSCLMG00005006309
LinkDB
All DBs
Position
16:6735203..6753161
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AA seq
418 aa
AA seq
DB search
MSARIAKSNPAMKLIVLFTASLSWAFQQQAVPPKYQYRDPVTSDLLLCDQCPPGTAVKRH
CAADSPTECQACPERHFAENWHWGDTCQYCTSVCKERQLVKQQCNSTNDQLCECAPGFHL
VVEFCITHSTCAPGYGVTALGTPASDTACERCPAGHFSSSDSPTEACQRQRNCSDMGLKT
LRWGTSTSNSLCGTPDKTATLECSQHHTLCHTDVTLCEEAVFQSLSSLRLSSVPLEHLLE
SLPGQRVDHKSLEKLKKTCSPQQQVLQLMRLWREQNKDQDKMYAIIQGMNHCEKKVSRCN
SLKNLTLDDLLKVTNSMPGIKVQQEDVRAVVSTCLPRQYILQLLHLWKISNHELDLAKGL
SHSLRVLRNQGAPRYLLKGLKRISRIIGTTSAHKMYEKMFVSMLHDESCFKAHKPLNE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcggatagcgaaatccaacccggccatgaaactgatcgtgctcttcacagcc
tctctttcctgggccttccagcagcaggccgtacctccaaagtaccagtaccgcgacccg
gtgacatctgacctcctgctgtgtgaccagtgccctcctggcacagccgtgaaacgacac
tgcgccgccgactcgcccacagagtgccaggcctgtcctgagaggcattttgctgagaac
tggcactggggggacacgtgccaatactgcacctcggtgtgcaaagagagacagcttgtg
aagcagcagtgcaacagcaccaacgaccagctgtgcgagtgcgctccaggtttccaccta
gtggtggagttttgcatcacacacagtacctgtgcacctggctacggagtgacagccctc
ggtacaccggcgagtgacaccgcatgtgaacgttgtcccgctggtcatttctccagcagc
gactctcccaccgaggcatgtcagcgccagaggaattgctctgatatgggcttgaagaca
ttgagatggggcacatccacttcaaacagcctctgtggcactccggacaagacggcaact
ctggagtgctctcagcatcacactttgtgccacactgatgtgaccctgtgtgaggaggcg
gtcttccagtctctctcctccctgcgactgtcctcggtgcccctggagcacctgttagag
agtcttcccgggcagagggtggaccataagagcctggagaagctgaagaagacctgctct
ccccagcagcaggtcctccagctaatgcgactctggagggagcagaacaaagaccaagac
aagatgtacgccatcatacaaggtatgaaccactgtgagaagaaagtctcccgctgcaac
agcctaaaaaatctgaccctggatgacctcctgaaggtcaccaacagcatgccggggatc
aaagttcagcaggaggatgtgcgggccgtggtctctacttgcctgcccaggcagtacatt
ctgcagcttcttcacctctggaagatatcaaaccacgagctggatctagccaaaggtctg
tctcacagtctgagggtgctgcgcaaccagggggcaccgcgctacctgctgaaaggcctg
aagaggatcagccgcatcataggaaccacctccgcgcacaagatgtatgagaagatgttt
gttagtatgcttcacgatgagtcgtgttttaaggctcataagccgttaaatgaatag
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