Cyclopterus lumpus (lumpfish): 117745436
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Entry
117745436 CDS
T09199
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117745436 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117745436 (phc1)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
117745436 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
DUF4912
Motif
Other DBs
NCBI-GeneID:
117745436
NCBI-ProteinID:
XP_034409655
Ensembl:
ENSCLMG00005001375
LinkDB
All DBs
Position
16:12114266..12120781
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AA seq
775 aa
AA seq
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MDAGEDQNAGTTNGNPPTSGNSRAPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINSAQLHNLAAVQQAATLAASRQSNTPSNSMSQATTTVNLSTTSAGATMTNPRPHGPA
TTTALNQSVLLGGNSAGQGQMYLRVNRSLRAPLASQLIFMPGGTTTATVAVAQTQPQQQQ
QQQSHEVTPAGAQSDNDQVQNLALHCNPRAVAVKSEIPERKDVAGFPLGHQLQTFAQTAQ
QQQVQPQQQQQMAKPNFTQHSSANTMTLKTGTPAASVAPSSTSSQALPLSQLLLSSSAAP
VILVPTSNVTTTTQGYSIGSVTQKANVNTQTLVVQPLQQASTTTEKGPVPIQPKTAQGHR
LPVQLPPRHPPHILPAPPSNSQHNSPHIPVQLVGARQGLTGNPQAVALAQARSGTAQEGT
AGGNVNAVSNNSAMIKPAIGSLKRKSDCDAPNEMATESSDPTLMKDSAPPLSPAPTKNSG
PPVAAAFSSPPTLSLPLPLSRVGHGDKDRAPVPQAVVKPQVLTHLIEGFVIQEGAEPFPV
AGLLKDRDFALVGRSENGPPLLKCEYCGSLAPASQFRGSKRFCSNTCAKRYNVSCSQHFK
TSRGRSGAGLAPPPATNESTARRRGPSRRSSSNITCNKISSRHLPVKCHSESSRSEDVSS
DGDEEDDSPSLSPSSSHSCSRAELSAPPSDSLAPGSLPLEGASFLSATPGQWSVEEVCRF
ISSLQGCEELAAQFLSQEIDGQALMLLREDHLISTMNIKLGPALKICASINTLRE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtgaagaccagaacgcgggcaccaccaatggaaatcctccgacaagtggg
aactctcgtgctccccagatagcccacatgtctctctatgagaggcaggctgtacaggct
ctccaagcactgcaaagacagccaaatgcagctcagtacttccagcagctgatgctgcag
cagcagatcaacagtgcccaactccacaacttggccgccgtgcaacaggctgctacgctt
gcagccagtcgacagtccaatacaccgagtaacagcatgtcccaggcaaccaccactgtc
aacctaagcaccacatctgcaggagctaccatgaccaacccccgtccccacggcccggcc
acaacaacagctctcaaccaatcggtgctgctcggtggaaactctgcaggacagggtcag
atgtaccttagggtcaaccgctctctcagggctcccctagcctctcagctcatcttcatg
cctggtggtacaacaacagctactgtagcagtcgcccagacacagccccagcagcagcaa
caacagcaatcacatgaagtcactcctgccggtgctcagtctgacaacgatcaggtgcag
aatctggccctccattgcaatccaagagcagttgcggtcaagtctgagattccggagagg
aaagatgttgccggctttcctctcggtcaccagctgcagactttcgcccagacagctcag
cagcagcaagtgcaaccacaacagcagcagcagatggccaaacccaactttactcagcac
tcctctgccaacaccatgactttaaagactggtactcctgctgcttcagtagcaccttcc
tccacctcctctcaagcactccctctctcccaactcctcctgtcttcctctgctgcccct
gtgatcctggtgcccacctcaaatgttacaaccaccacccagggctactccattggctca
gtgacccaaaaagccaacgttaacacgcagactctggtggtgcagcccctacaacaggcc
agcactactacagaaaaaggacctgtgccaatccagcccaagacggctcagggacaccgc
ttacctgtgcagctgcctcctcgacacccacctcacattctcccggcgccacctagcaac
agccagcacaacagtccccatatccccgtgcagctcgtgggagcccggcagggcttaaca
ggaaacccccaggctgtggctctagcacaggcacgaagcggcacggcccaggaaggtaca
gctggtgggaatgttaacgcagtctccaacaacagtgcgatgattaagcctgccattggc
tctctgaaaagaaaatctgactgtgatgctccaaatgagatggcgacagaatcctcagac
cctacactcatgaaagattctgcacctcccttatccccggcccctacaaagaactcgggt
cctcctgttgcagctgcattctcatctcctcccacactgtcgttgcctcttcccttgtca
agagtcgggcatggggacaaggacagagcgcctgttccccaggcagtggtcaaacctcaa
gtgctcacccacctcatagagggctttgtcatccaggagggagctgagcctttccccgtt
gccggactcctcaaagacagagattttgccctggttggccgctcagagaatggacctccg
ttgttaaaatgtgagtattgtggaagcctcgccccagccagccagtttagaggatcaaag
aggttctgttcaaatacctgtgcaaagaggtataatgtgagctgcagtcaacacttcaag
accagcagagggaggagtggtgctgggctggcaccacctccagctaccaatgagagcact
gctaggcgaagaggcccctctcgcaggagcagttctaatatcacttgtaataaaatatca
agcaggcatctacctgttaagtgtcactcagagtccagtcgctcggaggatgtatccagc
gacggggacgaagaggatgattctccctcactctccccaagctcctcccactcctgctcc
agagctgagctcagtgctcctccgtctgacagcttagctcctggtagcctcccactagag
ggtgctagcttcctctctgcaactcctggccagtggagcgtggaggaagtctgcaggttt
atctcttcacttcaaggctgtgaagagttggctgcccagtttctgtcacaggaaatagac
ggacaggctctgatgctcctgcgagaggaccatctcatctccacaatgaatatcaagctg
ggtcccgctctcaagatctgtgcctccatcaacaccctgcgtgagtga
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