Cyclopterus lumpus (lumpfish): 117745454
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Entry
117745454 CDS
T09199
Symbol
si:ch73-22o12.1
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03266
Virion - Herpesvirus
clum04514
Cell adhesion molecules
clum04520
Adherens junction
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117745454 (si:ch73-22o12.1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117745454 (si:ch73-22o12.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117745454 (si:ch73-22o12.1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117745454 (si:ch73-22o12.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117745454 (si:ch73-22o12.1)
04090 CD molecules [BR:
clum04090
]
117745454 (si:ch73-22o12.1)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
Nectin family
117745454 (si:ch73-22o12.1)
CD molecules [BR:
clum04090
]
Proteins
117745454 (si:ch73-22o12.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
C2-set_2
Ig_2
I-set
TM_ErbB1
DUF4342
Motif
Other DBs
NCBI-GeneID:
117745454
NCBI-ProteinID:
XP_034409691
Ensembl:
ENSCLMG00005009233
UniProt:
A0A8C2XFU2
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All DBs
Position
16:12788634..12858837
Genome browser
AA seq
531 aa
AA seq
DB search
MARRDARNWHDCSKMIGLLCLVASILIQHGVSGQRVKVEPEVLSYPGQTVNLRCAFTDAT
GMQLTMVTWIYEPKDGERINIAVFLPNFEPNYPASPVKGRVSFMPSPPNVNNPSIEISNV
RMNDEGKYICEYATYPTGNEQGITYLIMLAKPQNSASVVTVEAGGTKPVVVARCESVDGR
PAATISWVTAVNGNATTVAKTGADNTETISSEYRMLPTPADNGKDLSCVVAHRTQVKPDS
FLLKLAVQYAPLVTIVGYDNNWYVGRTNVMLTCQATANPAPLTTQWKTMSGEKPDTVQIT
DNVLKVLKVDDAVNTTFVCEVKNRIGIGRDTVTVIVREPSVSPSNAGVVAGAVIGSLLAL
LLVAALIAVLVTRSRRQQQGYRANGGSDMKTRIFGGGKKASKNGTGGGAGSGVGGGNNNG
PVYVYNESSSHQGIGEKNNHHQPLTIGGRPEVVATTPTAQDILLSNELDDVERRKFDELE
EDERYDQFTGGAPILQLRPPHDQDDMIGDYMDDDMESQRDGSVISRTAVYV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgtgacgcccgaaattggcacgactgctccaaaatgatcggactgctctgc
ttggtcgcgtcgatactcattcaacacggagtgtctggtcagcgggtgaaggtggagcca
gaagtgttgtcgtatcctggccaaactgtcaacctgcgctgcgccttcactgatgccact
gggatgcagctcacaatggtcacgtggatctacgagccgaaggacggagaaaggatcaac
attgctgtgtttctccccaactttgagcccaactaccccgcctcgcccgtgaagggcaga
gtcagcttcatgcccagtcctccgaacgtgaacaatccctccatcgagatcagcaatgtt
aggatgaacgatgaggggaagtacatctgcgagtatgccacctaccccacaggcaacgag
caaggcatcacgtacctgatcatgctggctaagcctcagaactcggcctccgtcgtcaca
gtggaagcaggtggcactaagccggtcgtcgtggcacgctgcgagtctgtcgacggccgc
cccgctgccacgatctcctgggtgaccgcagtcaacggcaatgcgacgacggtggccaag
acgggggccgacaacacggagaccatcagcagcgagtatcgcatgcttcccacaccggca
gacaacgggaaagacctcagctgtgtggtggcgcacaggacccaggtcaaaccagacagc
ttcctgttgaagctagcagttcagtacgcccctctggtgacaatagtgggttatgacaat
aattggtatgtgggtcgtacaaatgtgatgctcacctgccaggctaccgcaaaccctgct
ccattgaccacccagtggaagacgatgtcaggagagaagccagacacggtgcagatcaca
gacaacgtgctgaaggtgctgaaggtggacgatgctgtcaacaccaccttcgtctgcgag
gtcaagaaccgcatcgggatcggcagggatacggtcacagtcattgttcgagagccctca
gtgagcccatccaatgccggcgtggtggcaggagctgtgattggctccctgttggccctc
cttttggtcgccgcgctcatcgccgtgcttgtcacccgtagccgcaggcaacagcagggt
taccgcgccaatggcggcagtgacatgaagacgcgcatatttggcggtggcaagaaggcc
agcaagaacggcacgggtggaggcgcaggcagcggcgtcggaggcggcaacaacaacggc
cccgtatacgtttacaacgagagctcctcccaccagggcatcggggagaagaacaaccac
caccagccgctcaccattgggggccggcctgaagtcgtcgctactacacccacagcccaa
gatatcctgctgagcaatgaattggatgacgtggaaaggaggaagtttgatgagcttgag
gaggatgagaggtatgaccaattcaccggaggagcccccatccttcagcttcgcccaccg
catgaccaggacgatatgattggagattacatggatgacgacatggagtcccagcgggac
ggctctgtcatctcacggactgctgtttacgtgtag
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