Cyclopterus lumpus (lumpfish): 117745461
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Entry
117745461 CDS
T09199
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03250
Viral life cycle - HIV-1
clum03260
Virion - Human immunodeficiency virus
clum04060
Cytokine-cytokine receptor interaction
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117745461 (cd4-1)
03260 Virion - Human immunodeficiency virus
117745461 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117745461 (cd4-1)
04514 Cell adhesion molecules
117745461 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clum04090
]
117745461 (cd4-1)
CD molecules [BR:
clum04090
]
Proteins
117745461 (cd4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
I-set
V-set
C2-set
Orf78
DUF6249
RIFIN
DUF6377
Motif
Other DBs
NCBI-GeneID:
117745461
NCBI-ProteinID:
XP_034409717
Ensembl:
ENSCLMG00005006569
LinkDB
All DBs
Position
16:12585829..12600116
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AA seq
470 aa
AA seq
DB search
MRNVIRSVVLLLAALMSNAGAAEMIYARVGETVTLQPPGGINLQASYIYWKRNREDGPEL
AWRNTFGGKWTAPDEPWKDRLSLSGDALIIKDIQQTDFGTFVFKLDVGGGVISFTPYKLL
KLTVSVNPPSPLLPGDSLSLSCYTQTLEGYEDPEIQWLHPSGMKMTESRGPLTVKATGQD
NGQWTCVVTNDKKVTTAKVSVTVLDLSPAPLQPQYTSESWPLTVPCSLLAHISWEQIKAK
DIQEVHWYFVPEPSLSPQRLFSLSLDDPLTWEADQDRGLCPGPHPKKGNLSLTRNLGREE
DKGDYVCTLEFKNGATLNRTVHVKVLQIISSPGTELISGQQLNLTCSLGHPLTSDLQLKW
FPPGRSSLSSLTSDRHPARLTIPEVGPGVGGKWRCELWQSDVRLTSAEITLKIEPRMSLW
MLVVICSVTVIVILLLILVFILYRRRQKMIHLRRRLCQCKTPKPKGFYRT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgtaattcgctcagtcgtcctcctcctggctgcgctcatgtcaaacgcaggg
gcagcggagatgatatatgctcgagtgggagaaacggtgacccttcagcctccggggggt
attaatttacaagcttcttatatctactggaaacgtaatagagaggatggccctgaactt
gcctggcgcaatacctttggtggaaagtggaccgctccagatgaaccctggaaagaccgt
ctgtccttgtctggcgacgcactgatcatcaaagacatccaacaaacagactttgggact
tttgtctttaaactcgatgttggtggtggtgtcatttccttcactccgtataaacttctc
aaactcaccgtcagtgttaacccaccctcccctctgttgccgggggactcgctgtctttg
tcctgctacacacagactcttgagggttacgaggacccagagatacagtggctgcatccc
tcgggaatgaaaatgacagaaagtcgaggacccctcactgtgaaagccacaggccaagac
aacggccagtggacttgtgttgtgacaaacgataagaaagtgaccacggccaaagtctct
gttacggttttggacctctccccggcccctttgcagccccaatacacgtctgaatcctgg
cctctcaccgtcccctgttcccttcttgctcacatctcctgggaacaaatcaaagcgaag
gacatccaagaggttcactggtactttgtccctgaaccatctttgagtccacagaggctc
ttctccctctctctggacgacccgctgacctgggaggcagaccaagacagaggactgtgc
cccggaccacaccctaaaaaaggaaatctgtctttgactagaaatctggggagggaagaa
gacaaaggagattatgtgtgcaccctagaatttaaaaatggtgcgaccctgaacaggact
gtccacgttaaggtgctgcagatcatctcctctccgggaacagagttaatttctggccag
cagctcaacttgacttgcagcctcggccacccgctgacctccgacctacaactgaaatgg
tttccgcctggacggtcgtccctgtcgtctctgacatctgaccgtcaccccgcccgtctc
accatcccggaagtggggccaggagttggcggaaagtggagatgtgagctgtggcagagc
gatgtgcggctgacgtcggctgagataacgctgaagatcgaacccagaatgagtttgtgg
atgctggtggtcatctgtagtgtcacagtcatcgtgatcctcctgctcatcctggtattc
atcctctaccgacgcagacaaaagatgatacacctcaggcgtcgactctgccaatgcaaa
acccccaaacccaaaggattttacagaacataa
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