Cyclopterus lumpus (lumpfish): 117745471
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Entry
117745471 CDS
T09199
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04060
Cytokine-cytokine receptor interaction
clum04150
mTOR signaling pathway
clum04210
Apoptosis
clum04217
Necroptosis
clum04920
Adipocytokine signaling pathway
clum05132
Salmonella infection
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117745471 (tnfrsf1a)
04150 mTOR signaling pathway
117745471 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117745471 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117745471 (tnfrsf1a)
04217 Necroptosis
117745471 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117745471 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117745471 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
117745471 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
clum04050
]
117745471 (tnfrsf1a)
04090 CD molecules [BR:
clum04090
]
117745471 (tnfrsf1a)
Cytokine receptors [BR:
clum04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117745471 (tnfrsf1a)
CD molecules [BR:
clum04090
]
Proteins
117745471 (tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Baculo_11_kDa
Motif
Other DBs
NCBI-GeneID:
117745471
NCBI-ProteinID:
XP_034409733
Ensembl:
ENSCLMG00005002643
LinkDB
All DBs
Position
16:12299107..12306086
Genome browser
AA seq
396 aa
AA seq
DB search
MEGAGHRGRWDKTNPVGTILLLMCMFIPTLTLLEPSEEQTCPHGDYPTEKGICCNRCSPG
FKLVEKCNATGQRSTCAPCPAGQYTDQMNFFPNCLSCRRCKASKHEVEVSPCRRPQNTVC
RCEAGYYKSNIDSETYECRRCTPCGQEKEKEKQTCTAEKNTVCECTENYYRAKGKCKPCK
NCTAECKTHCSYPHSLNTIAPKIDEYLINIIAGVVVVTVVSLMLVVLITHVATKRSTKKK
LLKLTTQPSDVSPDSCEQVLVHSEEPSENMSVRAVPQSHVSEQEPSNLPDCVPLEIRIPD
LIYTVLDLVPVPQVKRLVRSLGVMDTEIEQAETDHRSCREANYQMLRVWAERGPRAGGGG
LGRMLHRPLLHELLDKLRMIHLGQAAEELETKYGIQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggagggagctgggcacaggggaagatgggacaaaacaaaccctgttggcacaatactc
ctcctcatgtgcatgttcatccccactctgacattgttagagccttctgaggagcagacg
tgtccacatggggactatcccactgaaaagggaatttgttgcaacagatgctctccaggt
tttaagcttgtagaaaagtgtaatgctacgggtcagagaagtacctgcgcaccctgtcct
gctggacaatacacagaccagatgaacttcttccccaactgtctaagttgcaggcgctgc
aaagcatcaaaacatgaagtggaggtatcaccatgtagaagaccgcaaaacacagtttgt
cgctgtgaggccggttattacaagtctaacatcgactcggaaacatacgagtgtcgcaga
tgtacaccatgtggacaggaaaaggaaaaggaaaaacagacatgtacagcagagaaaaac
actgtgtgtgaatgtacagagaactactacagagccaagggcaagtgtaaaccatgcaag
aattgtaccgctgagtgcaaaactcactgctcatacccccattctctgaatacaatagct
cctaaaattgatgaatatcttatcaacataattgctggagttgtagttgttactgtggtc
tcattaatgctcgtggttctcatcacccacgtggccacaaaacggtctacgaagaagaag
ttgctgaaactcaccacccaaccatcggacgtctccccagactcatgcgagcaagtcctg
gttcacagtgaggaaccttcagagaacatgagtgttcgagctgttccccaaagtcatgtg
agtgaacaggagccgtccaatctgcccgactgtgtccccctggaaatcaggatccctgac
ctgatctacactgtgctggatctggttcccgtaccgcaggtgaagcggctggtgcgatct
ctcggtgtgatggatacagagatcgaacaagccgagacggatcaccgatcctgccgcgag
gctaactaccagatgctgagggtgtgggctgagagagggccacgtgctggtggaggaggt
ctaggtagaatgctgcaccggcccttgttgcacgagttgttggacaaactgagaatgata
cacctgggacaagcagccgaggagctggagacaaagtacggcattcagtaa
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