Cyclopterus lumpus (lumpfish): 117745476
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Entry
117745476 CDS
T09199
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
clum04514
Cell adhesion molecule (CAM) interaction
clum04620
Toll-like receptor signaling pathway
clum04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117745476
04514 Cell adhesion molecule (CAM) interaction
117745476
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117745476
04672 Intestinal immune network for IgA production
117745476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
clum04050
]
117745476
04090 CD molecules [BR:
clum04090
]
117745476
Cytokine receptors [BR:
clum04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117745476
CD molecules [BR:
clum04090
]
Proteins
117745476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_ELAPOR1_6th
TMEM100
Motif
Other DBs
NCBI-GeneID:
117745476
NCBI-ProteinID:
XP_034409741
Ensembl:
ENSCLMG00005002660
UniProt:
A0A8C2WMG5
LinkDB
All DBs
Position
16:12395938..12402530
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AA seq
334 aa
AA seq
DB search
MNCTSEDKYTQKDGRCCDRCAAGQYMRAECDDTHTTKCATCVLGSYTATKNHMLKCHVCK
DCSSINNQKKVKDCTAKENTVCRCMEGFYCSNDPCDHCWALTHCLLGEGVKVQAAHTNDT
ICAPCQEGTYSNVTDFHSACQTHTRCEDIGRVLKTPGTPKTDAICGNFKSHCSWILPTCL
WSGLLLTALILFGVICWRAKRKSYKAEKNETRTFLQHPFKSTGADSCVAVSRVEMVAAAP
ITQLEKSLPITEMNGHYQDCCPLEGCKIPLFIPDDSVVSCDTQEQHVDGSLPKTPLKASV
SFTDSNHINGNAGYCTGNFLRTYSEPQEDEWCGT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcacaagtgaggataagtacactcaaaaagatgggagatgctgtgatcgctgt
gctgcagggcagtacatgcgtgctgagtgtgatgacacacacacaaccaagtgtgctaca
tgcgtacttggtagttacacagccacaaaaaatcacatgctaaaatgtcacgtctgcaag
gactgcagttccattaacaatcagaagaaagtaaaggactgtacagctaaagagaatacg
gtgtgtaggtgtatggagggtttctactgtagcaacgatccctgtgaccactgctgggca
ctgacccactgccttctgggagaaggagtcaaggttcaagccgctcacacgaatgatacg
atctgcgctccgtgtcaagagggaacctacagcaacgtgacagacttccactcggcctgt
caaacacataccagatgtgaggacatcggaagagtgttgaaaactccaggaaccccaaaa
actgacgctatctgtggcaacttcaaatctcattgttcctggatattacccacatgcttg
tggtccggactcttgttgacggcactcatcctgtttggtgtcatctgctggagggcaaaa
cgcaagtcttacaaagcagaaaaaaatgaaaccaggacatttttacaacaccctttcaag
tctacaggagccgactcctgtgtggccgtttctcgggttgaaatggtggcagcggcaccg
atcactcagctggagaagtctttaccgatcacagagatgaacggtcactaccaggactgc
tgccccctggagggctgcaaaataccactttttatcccagatgacagcgtggtcagttgt
gacacacaagaacaacacgtggacggcagcctccctaaaactccactgaaggcttcagtt
tcatttactgactccaaccacatcaatgggaatgctggatattgcactggaaacttcttg
aggacctactcggagccacaggaggacgagtggtgtggcacataa
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