Cyclopterus lumpus (lumpfish): 117745569
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Entry
117745569 CDS
T09199
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like
KO
K06752
MHC class II antigen
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04145
Phagosome
clum04514
Cell adhesion molecules
clum04672
Intestinal immune network for IgA production
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117745569
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117745569
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117745569
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117745569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117745569
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117745569
Exosomal proteins of epithelial cells
117745569
Exosomal proteins of breast milk
117745569
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
MHC_II_beta
C2-set_3
Ig_3
Motif
Other DBs
NCBI-GeneID:
117745569
NCBI-ProteinID:
XP_034409871
Ensembl:
ENSCLMG00005006396
UniProt:
A0A8C2X0U9
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All DBs
Position
16:complement(10217432..10220331)
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AA seq
245 aa
AA seq
DB search
MRIHSFFSLLFRLLLYSRADALFGHGFIRCQFTSSNDTVYLEQYYINKMLLLQYNSTLGN
VTGYTKKAIEIARDFNKSPTFLRQEKKNLEKCKSHVSLLLDVLSKTVEPSVRLRSVDAAG
SKHPGMLVCSVYGFYPKQIRVTWQKNGNNVTSDVTSTEELSNGNWLYQIHSYLEFTPTPG
EKITCMVEHASLTGPKLYEWDPTFESQRNKIAVGTAGLVLGLVSLVTGMIFYKKNHAGRI
LVPTS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcacagcttcttttctttgctgtttcggctccttttatattcaagagctgat
gctctctttggtcatggttttattcggtgccagtttacttcctccaatgacaccgtttat
ttggagcagtactacatcaacaagatgctactgctccaatacaacagcactttgggaaac
gttaccggctacacaaagaaagcaatagaaattgcacgtgacttcaacaaaagcccgact
ttcctgagacaagaaaaaaagaatctggagaaatgcaaatcccacgtctcattattattg
gatgtcctttcaaaaacagtggagccctccgtcaggctgaggtcagttgatgcagcaggc
agcaaacatccaggcatgctggtctgcagtgtgtacggcttttatcccaaacaaatcaga
gtgacttggcagaagaacggaaataatgtgacatctgatgtgacgtccactgaagaactg
tccaatgggaattggctctaccagattcactcatatctggaatttacacccacacctgga
gagaaaatcacctgtatggtggagcatgccagcctcacagggcccaagctttatgagtgg
gacccaacatttgagtcacagaggaacaaaattgctgtcgggacagcagggctggtgctg
ggtctggtgtctttagttactgggatgattttctacaagaagaaccatgctggccgaata
ttggtgccaacaagttaa
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