KEGG   Cyclopterus lumpus (lumpfish): 117746560
Entry
117746560         CDS       T09199                                 
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
  KO
K10375  tropomyosin 4
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04260  Cardiac muscle contraction
clum04261  Adrenergic signaling in cardiomyocytes
clum04814  Motor proteins
clum04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    117746560
   04820 Cytoskeleton in muscle cells
    117746560
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    117746560
   04261 Adrenergic signaling in cardiomyocytes
    117746560
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117746560
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     117746560
SSDB
Motif
Pfam: Tropomyosin CLZ CEP135_TSGA10_CC CCDC39 HmpF ATG16 PUMA_CC CCDC170_1st Rod_CreS DUF3450 XhlA Pex17 ADIP Sec2p ERM_helical BNI5_helical HAUS1 CC_Bre1 CENP-F_leu_zip Exonuc_VII_L Fez1 Lebercilin SlyX TMF_DNA_bd FKBP15 Laminin_I FPP Nuf2_DHR10-like DUF2730 DUF1664 LEKR1
Other DBs
NCBI-GeneID: 117746560
NCBI-ProteinID: XP_034411669
Ensembl: ENSCLMG00005020486
UniProt: A0A8C3ALZ4
LinkDB
Position
17:12983836..12992682
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAESDKKAAEDKCKQLEDELLALQKKLKGTEDELDKY
SEALKDAQEKLELSETKAADAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEIAELKCADLEEELKNVTNNLKSLEAQSDKYSEKEDKYEEEIKVLSDRLKEAETRAE
FAERTVAKLEKTIDDLEENLSKEKEQNVGMHQVLDQTLQELNSL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaagaagatgcagatgctgaagttagacaaggagaacgccatcgac
agggcagaacaggccgaatccgacaagaaggcggccgaggacaaatgcaagcagctggag
gatgagctgctcgctctgcagaagaagctgaagggaacggaggatgagcttgacaagtac
tccgaggccctgaaggatgctcaagagaaactggaactgtcagagacgaaggccgcagat
gcggagggcgatgtggcatctttgaaccgcaggatccagctggtggaggaggagttggac
cgcgctcaggagcgactggccacagccctgcagaaactggaggaggctgagaaggctgca
gatgagagtgagagaggcatgaaggtgattgagaacagagcgatgaaagatgaggagaag
atggagatccaggagatgcaactcaaagaagcgaaacacatcgctgaggaggcggatcgc
aaatacgaggaggttgcccgtaaactggtcatccttgagggtgagctggagagagcagaa
gagagggcagaaattgcagaactcaagtgtgctgacctggaagaagagctgaagaatgtc
accaacaacctcaagtccctagaggctcagtctgataagtactctgagaaagaagacaaa
tatgaggaggagattaaagtcctgagtgacagacttaaggaggcggaaacccgtgcagaa
ttcgcagagaggacagtggctaagctggaaaagaccatagatgacttggaagagaaccta
tcgaaagaaaaagagcaaaatgtaggaatgcatcaagtcctggaccaaacactgcaggag
ctgaatagcttgtaa

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