KEGG   Cyclopterus lumpus (lumpfish): 117746792
Entry
117746792         CDS       T09199                                 
Name
(RefSeq) toll-like receptor 2
  KO
K10159  toll-like receptor 2
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04145  Phagosome
clum04620  Toll-like receptor signaling pathway
clum05132  Salmonella infection
clum05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117746792
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117746792
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117746792
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117746792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117746792
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117746792
   04054 Pattern recognition receptors [BR:clum04054]
    117746792
   04090 CD molecules [BR:clum04090]
    117746792
   00536 Glycosaminoglycan binding proteins [BR:clum00536]
    117746792
Membrane trafficking [BR:clum04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    117746792
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   117746792
Pattern recognition receptors [BR:clum04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   117746792
CD molecules [BR:clum04090]
 Proteins
  117746792
Glycosaminoglycan binding proteins [BR:clum00536]
 Hyaluronan
  Cell surface receptors
   117746792
SSDB
Motif
Pfam: LRR_8 TIR LRR_4 TIR_2 LRR_9 LRR_1 LRR_5
Other DBs
NCBI-GeneID: 117746792
NCBI-ProteinID: XP_034412027
LinkDB
Position
1:20710035..20714910
AA seq 792 aa
MSIVPFLSCVLLLMHQSSSLSAARCHGCEPTSCNCSRQSLQAIPEGPSKLIAELDLSFNR
LRTIMKNDFVAFSRLQSLLVNNNRIQKIHDEAFFPLTNLEKLDLSFNRLETLSAGWFERL
VSLQHLNLLGNRYALLGRGNLFQPLKRLKTLHFGGPDLQSVRKGDFSGLRALEEVVFDGK
NLRVYAEGSLSQIGPLKYVTLALNGPFWRHPTLVEAVLSDVVHPDTTLSFTDSRFSTRDQ
ILPFNVARGTTSVIFKNVTMTFMACIAFLDIMSDSNLTSLALVDTKILRTSFRGIGYPRQ
MKRLEALVFRNVAVPRFYNFPALLFLRPLVGMVRRLSLLNSEFFLWPCVYSADFSRLDFM
DVSDNLLSDALLSQMMCDGDGGLWRLQTINVSRNHLQTINSRLFTKLIELKNIDLSGNAF
HVMPETCYWPPSLQFLNLSSTHLTQVTTCLPVSLRTLDLSDNGLTAFNIQLPFLTRLRLS
GNKIVRLPDGLLYPRLAFLSIQNNNLQTFSGSNLNPYKDLKILEAAGNKYVCSCDFVAFV
TSSRSADRRVALGDDTRSYVCDSPDAVRGKSAADAGLSAFECHAALALSLLCGGMLAPIV
LVAALCHKFSVAWYLKMTWFWLRAKRRPKLNKRELEYDAFVSYSEMDSGWVDAHLVPELE
QSEPPLRLCIHKRDFVPGGWILDNIMDAVEKSHRTLFVLSRHFLSSEWCKYELDYTHFRA
FDQNDDTVVLILLEPIDKETVPKKFCRLRRVMNSRTYLEWPDDGDRVPRFWHSLKAALKR
PDNGNCYFEKVD
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgtcgatcgtcccttttctctcgtgtgtcctgctgctgatgcatcagagctcctcgctc
tccgcagcccggtgtcacggttgtgagccgacatcctgcaactgctccagacaaagcctg
caggcgatccccgaggggccttcaaagctcatcgccgagctcgatctctccttcaacaga
ctgcggacgataatgaaaaatgactttgttgcattttcccgtttgcagtctttgttggtg
aacaacaaccgaatccaaaagatccacgacgaagcatttttcccgttgactaatttggag
aagttggacttgtccttcaacagactggagacgttgtcagctggatggtttgaacgcctt
gtttctcttcagcacttgaatcttttggggaaccggtacgcactgttgggtcgaggcaac
cttttccagccgctgaagagattaaagaccctacatttcggaggacctgaccttcaatct
gtccgaaaaggtgacttctctggcctccgcgctctcgaagaggttgtttttgatggaaag
aatctgcgggtctacgcagaaggaagtttgagtcaaatcgggccacttaaatatgtcacg
cttgctctgaatggtccgttttggagacatccaacgctggtagaagccgtactgtctgat
gtcgtgcacccagacacgaccttgtcattcactgactcgcggttctcaacacgggatcaa
atcctcccgttcaacgtggcccgcggaaccacaagtgttatttttaaaaatgttaccatg
accttcatggcttgcattgcatttctggatattatgtcggactctaatttgacttcgttg
gcacttgtagatactaaaatcctcagaacttctttccgtggcatcggatatccccgacaa
atgaagcgcttggaggcgctcgtcttccgaaacgtggccgtccctcggttttacaacttc
ccagccctcctgttcctgcgacctctggtgggcatggtgcgaagactgtctctgctcaac
agcgagttcttcctctggccctgcgtgtactccgccgatttctcccgactggacttcatg
gacgtcagcgacaacctgctcagtgacgcgctcctcagccagatgatgtgcgatggcgac
ggcggtctttggaggctgcaaaccatcaacgtcagcaggaatcacctgcagaccatcaac
agccggctcttcaccaaactgattgagcttaaaaacatcgacctgagtgggaatgcgttc
cacgtgatgcctgagacttgttactggccgccgagtctccagttcttaaacctttcatcg
acacatttaacacaggtaaccacctgtttgccggtgagtttacgaaccctcgacctatcg
gacaacggcttgaccgcgttcaacatccaactgccttttctcacacgtttacgcctctct
ggcaacaagatcgtgcggctgccggacgggctcttgtacccccggctcgcgttcctctcc
atccagaacaacaacttgcagacgttcagcggcagcaatctgaatccttataaggacctg
aagattctggaggccgccggtaacaagtacgtctgctcgtgcgactttgtggcgttcgtg
acgtcgagtcgctcggcggatcgccgagtcgcactcggagacgataccaggtcgtacgtc
tgcgactcccccgacgccgtgagagggaagagcgcggcggacgccgggttgtcggcgttc
gaatgccacgcggctttggcgctgtctttgctctgcggcggcatgctggcgccgattgtg
ctcgtcgccgctttgtgtcacaaattcagcgtcgcgtggtacctgaagatgacctggttc
tggctgagggccaagaggaggcccaagttgaataagagagagctcgagtacgacgccttt
gtgtcctacagtgaaatggactccggttgggtggatgctcatctggtcccggagctggag
cagtccgagcctcctctccggctctgcatccacaagagagactttgttcccggaggctgg
atcttggacaacatcatggacgccgtggagaagagtcacagaaccctgtttgtcctttct
cggcattttctcagcagcgaatggtgcaagtacgagctggactacacccatttcagagcg
ttcgaccaaaacgacgacacggttgtgctgattctgttggagcccattgacaaagagacc
gtccccaaaaagttctgcaggctgcggagagtcatgaactccaggacgtacctggagtgg
cccgatgacggcgaccgcgtccccaggttctggcacagcttgaaagcggctctcaagaga
cccgataacgggaactgttactttgaaaaagtggactaa

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