Cyclopterus lumpus (lumpfish): 117746792
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Entry
117746792 CDS
T09199
Name
(RefSeq) toll-like receptor 2
KO
K10159
toll-like receptor 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04145
Phagosome
clum04620
Toll-like receptor signaling pathway
clum05132
Salmonella infection
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117746792
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117746792
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117746792
09171 Infectious disease: bacterial
05132 Salmonella infection
117746792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117746792
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117746792
04054 Pattern recognition receptors [BR:
clum04054
]
117746792
04090 CD molecules [BR:
clum04090
]
117746792
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117746792
Membrane trafficking [BR:
clum04131
]
Endocytosis
Phagocytosis
Toll-like receptors
117746792
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of breast milk
117746792
Pattern recognition receptors [BR:
clum04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117746792
CD molecules [BR:
clum04090
]
Proteins
117746792
Glycosaminoglycan binding proteins [BR:
clum00536
]
Hyaluronan
Cell surface receptors
117746792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_9
LRR_1
LRR_5
Motif
Other DBs
NCBI-GeneID:
117746792
NCBI-ProteinID:
XP_034412027
LinkDB
All DBs
Position
1:20710035..20714910
Genome browser
AA seq
792 aa
AA seq
DB search
MSIVPFLSCVLLLMHQSSSLSAARCHGCEPTSCNCSRQSLQAIPEGPSKLIAELDLSFNR
LRTIMKNDFVAFSRLQSLLVNNNRIQKIHDEAFFPLTNLEKLDLSFNRLETLSAGWFERL
VSLQHLNLLGNRYALLGRGNLFQPLKRLKTLHFGGPDLQSVRKGDFSGLRALEEVVFDGK
NLRVYAEGSLSQIGPLKYVTLALNGPFWRHPTLVEAVLSDVVHPDTTLSFTDSRFSTRDQ
ILPFNVARGTTSVIFKNVTMTFMACIAFLDIMSDSNLTSLALVDTKILRTSFRGIGYPRQ
MKRLEALVFRNVAVPRFYNFPALLFLRPLVGMVRRLSLLNSEFFLWPCVYSADFSRLDFM
DVSDNLLSDALLSQMMCDGDGGLWRLQTINVSRNHLQTINSRLFTKLIELKNIDLSGNAF
HVMPETCYWPPSLQFLNLSSTHLTQVTTCLPVSLRTLDLSDNGLTAFNIQLPFLTRLRLS
GNKIVRLPDGLLYPRLAFLSIQNNNLQTFSGSNLNPYKDLKILEAAGNKYVCSCDFVAFV
TSSRSADRRVALGDDTRSYVCDSPDAVRGKSAADAGLSAFECHAALALSLLCGGMLAPIV
LVAALCHKFSVAWYLKMTWFWLRAKRRPKLNKRELEYDAFVSYSEMDSGWVDAHLVPELE
QSEPPLRLCIHKRDFVPGGWILDNIMDAVEKSHRTLFVLSRHFLSSEWCKYELDYTHFRA
FDQNDDTVVLILLEPIDKETVPKKFCRLRRVMNSRTYLEWPDDGDRVPRFWHSLKAALKR
PDNGNCYFEKVD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgtcccttttctctcgtgtgtcctgctgctgatgcatcagagctcctcgctc
tccgcagcccggtgtcacggttgtgagccgacatcctgcaactgctccagacaaagcctg
caggcgatccccgaggggccttcaaagctcatcgccgagctcgatctctccttcaacaga
ctgcggacgataatgaaaaatgactttgttgcattttcccgtttgcagtctttgttggtg
aacaacaaccgaatccaaaagatccacgacgaagcatttttcccgttgactaatttggag
aagttggacttgtccttcaacagactggagacgttgtcagctggatggtttgaacgcctt
gtttctcttcagcacttgaatcttttggggaaccggtacgcactgttgggtcgaggcaac
cttttccagccgctgaagagattaaagaccctacatttcggaggacctgaccttcaatct
gtccgaaaaggtgacttctctggcctccgcgctctcgaagaggttgtttttgatggaaag
aatctgcgggtctacgcagaaggaagtttgagtcaaatcgggccacttaaatatgtcacg
cttgctctgaatggtccgttttggagacatccaacgctggtagaagccgtactgtctgat
gtcgtgcacccagacacgaccttgtcattcactgactcgcggttctcaacacgggatcaa
atcctcccgttcaacgtggcccgcggaaccacaagtgttatttttaaaaatgttaccatg
accttcatggcttgcattgcatttctggatattatgtcggactctaatttgacttcgttg
gcacttgtagatactaaaatcctcagaacttctttccgtggcatcggatatccccgacaa
atgaagcgcttggaggcgctcgtcttccgaaacgtggccgtccctcggttttacaacttc
ccagccctcctgttcctgcgacctctggtgggcatggtgcgaagactgtctctgctcaac
agcgagttcttcctctggccctgcgtgtactccgccgatttctcccgactggacttcatg
gacgtcagcgacaacctgctcagtgacgcgctcctcagccagatgatgtgcgatggcgac
ggcggtctttggaggctgcaaaccatcaacgtcagcaggaatcacctgcagaccatcaac
agccggctcttcaccaaactgattgagcttaaaaacatcgacctgagtgggaatgcgttc
cacgtgatgcctgagacttgttactggccgccgagtctccagttcttaaacctttcatcg
acacatttaacacaggtaaccacctgtttgccggtgagtttacgaaccctcgacctatcg
gacaacggcttgaccgcgttcaacatccaactgccttttctcacacgtttacgcctctct
ggcaacaagatcgtgcggctgccggacgggctcttgtacccccggctcgcgttcctctcc
atccagaacaacaacttgcagacgttcagcggcagcaatctgaatccttataaggacctg
aagattctggaggccgccggtaacaagtacgtctgctcgtgcgactttgtggcgttcgtg
acgtcgagtcgctcggcggatcgccgagtcgcactcggagacgataccaggtcgtacgtc
tgcgactcccccgacgccgtgagagggaagagcgcggcggacgccgggttgtcggcgttc
gaatgccacgcggctttggcgctgtctttgctctgcggcggcatgctggcgccgattgtg
ctcgtcgccgctttgtgtcacaaattcagcgtcgcgtggtacctgaagatgacctggttc
tggctgagggccaagaggaggcccaagttgaataagagagagctcgagtacgacgccttt
gtgtcctacagtgaaatggactccggttgggtggatgctcatctggtcccggagctggag
cagtccgagcctcctctccggctctgcatccacaagagagactttgttcccggaggctgg
atcttggacaacatcatggacgccgtggagaagagtcacagaaccctgtttgtcctttct
cggcattttctcagcagcgaatggtgcaagtacgagctggactacacccatttcagagcg
ttcgaccaaaacgacgacacggttgtgctgattctgttggagcccattgacaaagagacc
gtccccaaaaagttctgcaggctgcggagagtcatgaactccaggacgtacctggagtgg
cccgatgacggcgaccgcgtccccaggttctggcacagcttgaaagcggctctcaagaga
cccgataacgggaactgttactttgaaaaagtggactaa
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