KEGG   Cyclopterus lumpus (lumpfish): 117747396
Entry
117747396         CDS       T09199                                 
Symbol
rela
Name
(RefSeq) transcription factor p65 isoform X1
  KO
K04735  transcription factor p65
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04010  MAPK signaling pathway
clum04137  Mitophagy - animal
clum04210  Apoptosis
clum04218  Cellular senescence
clum04620  Toll-like receptor signaling pathway
clum04621  NOD-like receptor signaling pathway
clum04622  RIG-I-like receptor signaling pathway
clum04623  Cytosolic DNA-sensing pathway
clum04625  C-type lectin receptor signaling pathway
clum04920  Adipocytokine signaling pathway
clum05132  Salmonella infection
clum05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117747396 (rela)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    117747396 (rela)
  09143 Cell growth and death
   04210 Apoptosis
    117747396 (rela)
   04218 Cellular senescence
    117747396 (rela)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117747396 (rela)
   04621 NOD-like receptor signaling pathway
    117747396 (rela)
   04622 RIG-I-like receptor signaling pathway
    117747396 (rela)
   04623 Cytosolic DNA-sensing pathway
    117747396 (rela)
   04625 C-type lectin receptor signaling pathway
    117747396 (rela)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    117747396 (rela)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117747396 (rela)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117747396 (rela)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:clum03000]
    117747396 (rela)
Transcription factors [BR:clum03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    117747396 (rela)
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer Mesd
Other DBs
NCBI-GeneID: 117747396
NCBI-ProteinID: XP_034412452
Ensembl: ENSCLMG00005003299
LinkDB
Position
18:12807092..12817832
AA seq 624 aa
MEGVYGWGLATLNPVQAASPFIEIIEQPKQRGMRFRYKCEGRSAGSIPGEKSNDTTKTNP
AIKMHNYSGPLRIRISLVTKNMPHKPHPHELVGKDCKHGYYEADLQERRIHSFQNLGIQC
VKKKDVNEAITCRLQTNNNPFNIPEAKVWEEEFDLNSVRLCFQAFITLASGDLIPLEPVV
SQPIYDNRAPNTAELKICRVNRNSGSCKGGDEIFLLCDKVQKEDIEVRFFQDSWEGKGTF
SQADVHRQVAIVFRTPPYRDTNLSEPIRVKMQLRRPSDREVSEPMDFQYLPADPDEYRLS
DKRKRTGDMFQSLKLGPMLSSVSMPQDRRHISPARRAVSAKLPSMNTQVAAAAPPGASGA
KAQPSYSYQPGQLFSVQPKVEVSTISAATPKQTWRIMETLNLGHQPKATPVPNFPMSQPK
APCSVTTTSTTNQDYSTVNLADLQQFFPDISSAMVQETAASQGSLSSSQTGISFTLPGSQ
FHVDAPLADDDIPEFPSFSESQPQGTLDNLNMDEFEDLLNVSGNGTSMLAQASCQQASPA
SSSTAAHNAASHNISDPASIPGSTWMNYPNSIVNLLQNEGMIDNGNHRPPVLDEFDELMS
ADEDRLISIFNGGSQAGFVSGHPT
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggagggtgtgtatggatggggcctggccacactcaacccagtccaagcggcgagcccc
ttcatagagatcatcgagcagccgaagcagagggggatgaggtttaggtacaagtgtgag
ggccgttcagccggcagcatccccggagagaagagcaacgacaccactaagaccaaccca
gccatcaagatgcacaactacagcggccccctgcgtattcgcatctcgttggtgacgaag
aacatgccgcacaagcctcacccgcacgaactggtcgggaaagactgcaaacacggctac
tacgaggcggacctgcaggagagacgaatacacagttttcagaacctgggcattcagtgt
gtcaagaagaaggatgtgaatgaggccatcacttgtcggctgcagaccaataataacccc
ttcaacattcccgaggccaaggtgtgggaggaggagtttgacctgaactcagttcggctt
tgcttccaggccttcatcactctggcttcaggggacctgattcctctggagccggtggta
tcgcagcccatctacgacaacagggccccaaacacagctgagctgaagatctgccgagtc
aaccgcaactctggcagctgcaaaggaggcgatgaaatcttcctgctgtgtgacaaagtg
caaaaagaggacatcgaggtgcgcttcttccaggactcctgggagggaaagggcactttc
tctcaggccgacgtccacaggcaggtggccattgtgttccgcacgccgccataccgcgac
acgaacctcagcgaacccattcgggtcaagatgcagctccgccggccctctgaccgcgag
gtcagcgagccgatggacttccagtacctgccggctgacccagatgaatacaggctgagt
gacaagagaaagcgtacaggggacatgttccaaagcctgaagctggggcccatgctatct
agtgtgtccatgccacaagatagacggcacataagcccagcaagaagggcggtttcagcc
aagcttccatcaatgaatacacaagttgcagctgcggcgccccctggtgccagtggagcg
aaagcccagccttcctactcgtatcaaccgggccagctcttctcggtccagccaaaggtc
gaggtctccaccatctccgctgcaactccaaagcagacatggaggatcatggagacccta
aacctgggccaccagcccaaagccactccggtgcccaactttccaatgagccagccaaaa
gcaccctgctccgttaccaccacgtccaccactaaccaggactactcaaccgtcaacctg
gcagaccttcaacagttcttccccgacatctcctcggccatggtccaggagacggcagct
tctcagggaagcttgtcctcctcacagaccggcatctccttcaccctcccaggctctcag
ttccatgtggacgcaccacttgcggacgacgatatcccagagttcccgagcttttccgaa
tcccagccgcaaggtaccctggacaacctgaacatggatgagtttgaggacctcctgaac
gtgagcggaaatggcacctcgatgttggcgcaggcttcatgtcaacaagcctccccggcc
agctcttctacggcggcccacaacgcagcgtcccacaacatttctgaccctgccagcatc
ccaggaagcacctggatgaattaccccaacagcatcgtcaaccttctccagaacgagggc
atgatcgacaacggcaaccaccggccccctgtgctggatgagtttgacgagttgatgtcc
gctgacgaggaccgtcttatttccatctttaacggtggaagccaagctgggtttgtttca
ggacacccaacctaa

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