KEGG   Cyclopterus lumpus (lumpfish): 117748519
Entry
117748519         CDS       T09199                                 
Name
(RefSeq) uncharacterized protein LOC117748519
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03440  Homologous recombination
clum03460  Fanconi anemia pathway
clum04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117748519
  09124 Replication and repair
   03440 Homologous recombination
    117748519
   03460 Fanconi anemia pathway
    117748519
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clum01009]
    117748519
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117748519
   03036 Chromosome and associated proteins [BR:clum03036]
    117748519
   03400 DNA repair and recombination proteins [BR:clum03400]
    117748519
Enzymes [BR:clum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117748519
Protein phosphatases and associated proteins [BR:clum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117748519
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117748519
  Multi subunit type E3
   BRCC complex
    117748519
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     117748519
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     117748519
    BRCA1-A complex
     117748519
    BRCA1-B complex
     117748519
    BRCA1-C complex
     117748519
    BRCA complex
     117748519
   FA (Fanconi anemia) pathway
    Downstream FA components
     117748519
SSDB
Motif
Pfam: BRCT BRCT_2 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-RING_UBOX RING_XB3-XBAT31 zf-Nse RTT107_BRCT_5 zf-RING_5 zf-ANAPC11 zf-RING_10 zf-RING_4 PTCB-BRCT TRAF3_RING Baculo_IE-1 zf-rbx1 Sina_RING
Other DBs
NCBI-GeneID: 117748519
NCBI-ProteinID: XP_034414241
Ensembl: ENSCLMG00005002039
LinkDB
Position
19:11044076..11065010
AA seq 1407 aa
MQTPTTTDVRKGISVLWETLQCPICLDLMTAPVSTKCDHQFCKFCMMKLLDTKNNRADCP
VCKTKITKRSLQESPGFQKLVAGLQDMIQAYEHDTGTNYFTGMSQQEGQLGVTGAEATKH
CPDKSFGDTPDDMENVDNDDPLRSHSSTIAAQNGFAKLMGLEDTSPMTTEIEGLDSGLGE
APPTSDKKMHSPTDNLETEMTEVVETLTHKTRGKTRFLKLEKASLPPSLISDETEHQPLR
KSSRKKQKKDLEPDKILEEKQKKSLQKVAEWLMKVPTEGSLELDKRNEDTEDSDSCSSGS
TIDINTHNRDVNPKREERAKALEEQVFGAVYKRERRGNRTISPPLHVFSKTPTTKKQIIS
KIRKRKTLTPVDTSESGMEEEQQGIEEGNDTSSDIVTKAKQTEVMEDNSKDKYGEELNKM
PESDKIDDNDDFRCSASDIRQLPHRKSNRGTRNAPQQVDSDLQEQAEAKSESAEQKQTEK
RKSKNKRSEKSKTARVPKPLVLVGVTDGETSPKARPRSEVQVHIENYPSSEDQEIPVMRI
TRRSRRLQLFAEEVQEGHKTNLKANIAEKGNNVAKQSEEAKGGTLDYKASTQNGNMTRVA
ERNGCIFDQELEEIENMESGERTTEDVKESIAEVPNVSPLSEANAACYVVPSSTSPATAV
VEPTLESDDQNNTHQTKCAGTEDEEDKNDSELDTEQLLKSFKATKRKSFLLGAPNVKRSR
GLDQENLQAAEAEVKQRLCSGVESKKNLVYTKVPEISKQEALRDNENSSWSDFISPSNSP
IHTRKPVIEKPDQVAVEASIPDDSCSGQDSAGGTCVSRNSVSSALTPNKVQDIESTHLSV
GPQVLDSGLCFRAVEHEELNEPSKCSQVTENQLDCTVRDAGQGKEIRDRVSVHKSAASGT
HSVNSTQQSLNAESSLTPNGLGLPVVQIVHEATSHSHGSGEPSSHSSIKSVPRKRTRARR
LESSFESDCSEEGLPTLTEIFGTSVRPPAMTKDQGDSREDNRCEGAIAGGAQQLSRPPAC
PSPDCVNSSQGSVDLFGTPDECNVPVNDIGVSSQFETSQFSSEVLVTQQKIEMQKELVRL
EKMMALVSEVLQEKEDSPAKEVPSETNQSRQTTDANSKRLLPCDRDTGQSSDREAAPEVE
RESSTRPSAHGSRAEMGPGVKGTGASKTPSSSAAKTLKNSASVVDGKEDKENNTPPRDGR
KTKIVLVSSGLDPNEQLLVKRFSKRVGARVVSKVTPEVTHIIMHTDEQLVCERTLKYFLG
IAGRKWVVSFQWISECFRQKELLDESAFEVRGDVVNGPNHQGPMRARTSEDNNLLMKSYT
ICFQGPFTDMTTDEMEWMVELCGGTVVKDPLLLDSKRISHQLVIVQSGSESSSTYSSLSG
RATVVTRGWLLDSVATYTLQHHNKCTT
NT seq 4224 nt   +upstreamnt  +downstreamnt
atgcaaaccccgacaaccaccgatgtcagaaagggtatttcggtcctttgggagaccctg
cagtgtcccatatgcttggatttaatgactgcacctgtttctactaagtgtgaccatcag
ttttgcaaattttgtatgatgaaacttttggacaccaaaaacaacagggctgactgtcca
gtgtgtaaaaccaaaataaccaaaaggagcttgcaggagagtcctgggtttcagaaactt
gttgcaggcttgcaggacatgattcaggcatatgaacatgacactggcactaactacttc
actggaatgtcccagcaggaaggacagctaggagtcacaggggctgaagctactaaacat
tgtcccgataagtcattcggagatacacctgacgacatggaaaatgttgacaatgatgat
cctttaaggtctcactcctcgactattgcagctcagaacggatttgcaaaactgatggga
cttgaagacacaagtcctatgacgacagaaattgaaggcctggacagtggacttggtgag
gccccaccaacttccgacaagaaaatgcacagccctacagataatttggaaacagaaatg
acagaagttgtggaaaccttaacacacaaaactagaggcaaaacaagattcctcaaattg
gagaaagcctcccttcctccatcattaatttccgacgagactgaacaccaacctttaaga
aagtcctcaaggaagaagcagaaaaaggatttggagcctgacaagattttggaggaaaaa
cagaagaagagtctacagaaagttgctgagtggctcatgaaggttccaactgaaggaagt
ctcgagttggataaacgcaacgaagacacagaagattctgacagctgttcctctggttca
acaatagatataaatacacacaacagggatgtgaacccgaagagagaagaacgtgctaaa
gctcttgaagagcaggtgtttggtgctgtctacaaacgagagagaagagggaacaggacc
atctctcctccacttcatgtttttagcaaaacaccaacaaccaagaaacaaattatctcc
aaaataaggaagaggaagactctcactcctgttgatacaagtgaaagtggtatggaagag
gagcaacaagggatagaagaaggaaatgacaccagcagtgacattgtcacaaaagcaaaa
cagacggaggttatggaggacaattctaaagacaaatatggggaagagttgaacaaaatg
ccagaaagtgacaaaattgatgacaacgatgattttcgctgttccgcgtctgatattaga
cagctaccacacagaaagtcaaatagagggacacgtaacgctccgcagcaggtcgacagc
gatttgcaagagcaagctgaggcaaagtcagagagtgctgagcaaaagcaaactgagaag
aggaaaagtaaaaacaagaggtcagaaaaaagcaagactgctagagtgccaaaacccctg
gttctggtcggagttacagatggagaaaccagtcctaaggctagaccaaggtcagaagtt
caagttcacatcgagaattacccgagcagcgaagaccaagaaatccccgtcatgagaatc
acaaggagaagtagaagacttcaactcttcgctgaggaagtccaagagggtcacaagaca
aacttgaaagccaatatagctgaaaaaggcaacaatgttgcaaagcaatctgaggaagct
aaaggtggaacattggactataaggcatcaactcagaatggaaacatgacacgggtggct
gagagaaatggatgtatttttgatcaagagttagaagaaatagaaaacatggagtctggc
gagagaacaacagaagatgttaaagagtccattgctgaagtgccaaatgtttcaccgctg
tctgaagctaatgctgcatgttatgtggtcccaagctccacaagtccagctacggctgtg
gtcgagccaacacttgaaagtgacgaccaaaacaatactcaccagacaaaatgtgccgga
acagaagacgaggaggataagaatgacagtgagctggacacagagcaactgctcaagagc
ttcaaagccactaaaagaaaatctttccttcttggcgctccaaatgtgaaaaggagccgt
ggtttagaccaagaaaacctgcaggctgccgaggcagaggtaaaacagcgactttgttct
ggtgttgaatctaaaaaaaatctggtgtacacaaaggtacctgaaatctccaagcaagag
gcattaagagacaatgaaaactcatcttggagtgattttatctccccttctaactcaccc
atccacacaagaaagccagtcattgagaaaccagatcaagtggcggtagaagcctcaatc
cctgatgacagttgttcaggtcaagacagcgctggtggtacctgtgtctccaggaatagt
gtcagtagtgccctcactcctaataaagtgcaggatattgaaagtactcatctttctgtt
gggcctcaagtgttagattctggcctctgcttcagagccgttgaacatgaggagctaaat
gaaccctcaaagtgttctcaagtgacagagaatcagctggactgcaccgtgagggatgct
ggccaagggaaggagataagagaccgcgtttcggtgcacaagtcagctgctagtggaaca
cattcagtcaacagcactcagcagtctttaaatgcagagtcttctttaactcccaatggc
cttggacttccagttgtacaaattgtccacgaagcaacgtcgcacagccatggtagcgga
gagccgagctcccattcctccatcaagagcgtgcccaggaagaggacaagggccaggagg
ctagagtcgtcatttgagtcggactgcagtgaagagggattacccactttgacagagatt
ttcggaacatccgttcgtcctcccgctatgacaaaggatcagggagactcccgtgaagat
aatagatgtgagggcgctatagctggtggagcgcaacagttgagtcgtccacctgcgtgc
ccgagccccgactgcgttaactccagccaagggtctgtagacttgtttggcacgccagat
gaatgtaatgtcccagtgaacgacatcggcgtttcgtcacaattcgaaacctcacaattt
tcaagcgaagtccttgtaacacagcaaaagatagaaatgcagaaggagctggtgaggttg
gagaagatgatggcgctggtgtcagaggtgcttcaggagaaagaagacagtcctgcaaaa
gaagtcccctcagaaacaaatcagagcagacaaaccacagacgcaaactctaagagactc
ctcccgtgtgaccgggacacaggccaaagttcagaccgggaagctgctccagaagtagag
cgagagtccagcacaagaccgtcagcgcatggcagcagagcggagatggggccgggcgtt
aaaggcaccggagcctccaagacgccctcgagttcagctgccaaaacattaaaaaacagc
gcttcagtagtagacgggaaagaagacaaagaaaataatactcctccgagagatgggagg
aaaactaagattgtgttggtgtcgtctggattagaccctaatgaacagctactcgtcaaa
aggttttccaagcgagttggtgcccgtgtggtttctaaggtaaccccggaggtgacccac
atcataatgcacacagatgaacaactggtatgtgagcgcacactgaagtacttccttggc
atcgcaggcaggaagtgggtggtgagcttccagtggatttcagagtgcttcagacaaaag
gaactcctagatgagagtgcctttgaagtgagaggtgacgtggtgaatggacccaaccac
cagggccccatgagagcccgtactagtgaagacaataacttgctcatgaagagctacacg
atttgcttccaagggccttttacagacatgacaacagatgaaatggagtggatggtggag
ctctgtggaggcactgtagtcaaagatccacttctcctcgacagtaaacggatctcccat
cagctggtgattgtacagtctggatcagagtcgtcgtccacatacagcagtctctctgga
cgtgcaacagtcgtgacacgtggttggctgttggattcagtggcgacctacaccctccaa
caccacaacaagtgcacaacatga

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