Cyclopterus lumpus (lumpfish): 117748604
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Entry
117748604 CDS
T09199
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00514
Other types of O-glycan biosynthesis
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117748604 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117748604 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117748604 (rfng)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
117748604 (rfng)
Glycosyltransferases [BR:
clum01003
]
Glycan extension
O-Glycan
117748604 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
117748604
NCBI-ProteinID:
XP_034414421
Ensembl:
ENSCLMG00005017185
LinkDB
All DBs
Position
19:1927104..1935939
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AA seq
402 aa
AA seq
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MNRLCRPVRMHIAPVGVSKFCFLFSLAFCGLLLLLIPALQPPARQVDLPQPRPQVRPPRA
GLQHRVRFPGVSVRAGETDSAAELSRSSAVWTEGTRDDVRSPNRGMDSEGGATPGGKGGR
LSGYKSRDPLDFKDIFIAVKTTRKYHKSRLELLIQTWVSRAKEQTYIFTDGEDKELQTRT
GVNLINTNCSAAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLGLLSSYHH
SQDVYLGRPSLDHAIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFI
STAEKIRLPDDCTIGYIIEALLEVTLTHTHLFHSHLENLQKLPTDTVLEQVTLSFGGFEN
RRNVVSIVGGFSLAEDPTRFKTVHCLLYPDTNWCPKPEHSLN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggctctgtcggccagtcagaatgcacatagctccggtgggtgtcagcaagttc
tgcttcctgttttccctcgcgttctgtggcctcctgctcctgctcatccctgccctccag
cccccggcgcgccaggtggacctgccccagccccgaccccaagtcagacctccacgggcg
ggcctgcagcaccgtgtcagatttccaggagtgtctgtccgtgcaggggaaacagactct
gccgcagagctgagtaggagctcagcggtgtggactgaaggtaccagggatgatgtccgt
agtcccaataggggtatggactctgaaggaggagctacacctggaggaaagggtggtaga
ctttcagggtataagtcacgggacccgttagactttaaggacatttttattgcagtgaag
actaccaggaaataccacaagtccagactggagctgctgattcagacctgggtttcccga
gctaaagagcagacctacatattcaccgacggcgaggacaaggagctgcagacaagaacg
ggagtgaacctcatcaacactaactgctcagcagctcacacccgccaggccctgtgctgc
aagatgtcggtggagtacgataaattcatcgagtctcagaagaagtggttctgccacgtg
gatgatgataactacgtcatcctgcccagcctgctggggctgctctcctcctaccaccac
agccaggatgtctacctgggccggcccagtctggatcatgctatcgaggctgcagagagg
gtcaagagtgacggatcggtgtccgtcaagttctggtttgccacaggtggagcaggtttc
tgtatcagcagaggcctggcactgaaaatgagcccatgggccagtttggggaatttcatc
agcacggcagagaagatccgactaccggacgactgcaccatcggctacatcatcgaagcg
ctgctggaggtgaccctaacgcacacgcacctcttccactcccacctggagaaccttcag
aagctgcccactgacacagtgctggagcaggtcactctgagctttggaggctttgagaac
agaagaaatgtggtcagcattgttggaggcttttccctggctgaggaccccacgaggttt
aagacggtgcactgccttctctacccagacaccaactggtgtccaaagcctgaacacagc
ctgaactga
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