Cyclopterus lumpus (lumpfish): 117748724
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Entry
117748724 CDS
T09199
Symbol
pus3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117748724 (pus3)
Enzymes [BR:
clum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
117748724 (pus3)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117748724 (pus3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Penicillinase_R
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
117748724
NCBI-ProteinID:
XP_034414643
Ensembl:
ENSCLMG00005007221
UniProt:
A0A8C2XDR8
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All DBs
Position
19:11819436..11822214
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AA seq
480 aa
AA seq
DB search
MSEALIRRIKELEADLEKLKSQLKERSGPGDDVELTSDPSPLENTDCKSNTRTSKKGKKA
GKERPFDFHASPRRHAALRLAYLGWSYQGFAVQENTDNTVEARLFEALLKTRLIQDRQSS
NYHRCGRTDKGVSAFSQVITIDLRSTQFCGGLGVTVPEHVVVGAKNKATGAELPYVKMLN
RVLPQDIRILDWSPVAEGFSARFDCQSRTYRYYFPRGSLDVTLMADAAKRYEGTYDFRNL
CKMDVGNGVLQFERTILSASVKPVRPQLVSSADQYDLFIFEIKGLGFLYHQVRCMMALLL
LIGQKLEAPEIINQLLDVQSNPRKPQYSMAVDYPLVLYDCHFEGLSWKQETEEVTHVLSA
LQQHWTQSTVRTHVLHGMIQGLEARGGLSSNHCLLIEGSRQRNYRPLLERPCCESLESRI
NHFVKRGRLEREEGENGGKTLHRGKRSKHSHNPPSLPVLSEMPSSKQSTDQQAEHVLTGE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggctttaatcaggcgaataaaggagctggaggcagacctggagaagctcaag
tcccagctgaaggagaggagtggacccggagatgacgtggagctgacgtccgatccatcc
cctcttgaaaacacagactgtaaatccaatactcgcaccagtaaaaagggtaagaaagca
ggcaaagagcgtccttttgacttccatgccagccctcggcgccatgcggctctgcggctg
gcttacctgggatggtcctaccaggggtttgcggtccaggagaacaccgacaacactgtg
gaggccaggctctttgaagctttgctaaagacacggttgattcaggatcgacagagctcc
aactaccaccggtgtggtcgcaccgataaaggagtcagtgctttttcccaagtcataacc
attgatttgcgctccacacagttttgtggcggactgggagtcacggtccctgaacatgtt
gttgttggtgccaagaataaagctactggtgctgagcttccgtatgtgaagatgctgaac
agagtcctgccccaggacattaggatcttagactggtcaccagtagcagagggcttcagt
gcacgcttcgactgtcagtcgcgcacgtaccggtactacttcccccgtggatcgttggat
gtgacgttgatggcagatgctgcaaaaagatacgagggcacttatgactttcgcaacctg
tgcaaaatggatgtgggcaacggagtcctgcagtttgagaggaccatcttgtcagcatca
gtcaagcctgtgcggcctcagctcgtctccagcgccgaccagtatgacctcttcatattt
gagatcaaaggactgggcttcctttaccaccaggtacgatgcatgatggcactgcttctc
ctgatagggcagaaattggaagccccggagataattaatcaactcctggatgttcagagc
aaccccaggaagccccaatacagcatggctgtggactacccgctggtgctttacgactgc
cactttgaaggtttgagctggaaacaggagactgaagaggtgacccacgtcctgtctgca
ctacagcaacactggacccagagtacagtcaggacccacgtcctccatgggatgatccag
gggttggaggccagaggtggactgtcctctaatcattgcttgctaatagaaggcagcagg
cagagaaactaccggccgctgctggagcgtccgtgctgcgagagcctggagtccagaata
aaccattttgtcaaaagaggaaggctggaacgggaagaaggggagaatggaggcaaaacg
ctccacagaggaaaaaggtccaaacattcccacaatccccccagtctgcctgtactgtca
gagatgccatcttcaaaacaaagtacagatcaacaagctgaacatgttctcacaggagaa
tga
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