Cyclopterus lumpus (lumpfish): 117748836
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Entry
117748836 CDS
T09199
Symbol
snu13b
Name
(RefSeq) SNU13 homolog, small nuclear ribonucleoprotein b (U4/U6.U5)
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03008
Ribosome biogenesis in eukaryotes
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117748836 (snu13b)
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117748836 (snu13b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117748836 (snu13b)
03009 Ribosome biogenesis [BR:
clum03009
]
117748836 (snu13b)
Spliceosome [BR:
clum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117748836 (snu13b)
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
117748836 (snu13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
117748836
NCBI-ProteinID:
XP_034414827
Ensembl:
ENSCLMG00005013904
UniProt:
A0A8C3G208
LinkDB
All DBs
Position
19:complement(7156042..7157602)
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AA seq
128 aa
AA seq
DB search
MTEAQVNPKAYPLADATLSKTILDLVQQASNYKQLRKGANEATKTLNRGISEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQIQSVQ
LAIERLLV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcacaagtcaacccgaaggcctacccgctggccgacgccacgctatcaaag
actatcttggacctggtgcagcaagcatcaaactacaagcagctgagaaagggggctaat
gaagccactaaaactttgaacagaggcatttctgaatttattgtgatggctgctgatgct
gaacccctggagatcatcctccacctgccactgctttgtgaggacaagaatgtcccgtat
gtgtttgtccgctccaagcaggccctgggccgggcctgtggggtctctcgccctgtcata
gctacctcggtgaccataaaggaggggtctcagctcaaaccgcagattcagtctgttcag
ttggctattgagagactgcttgtctga
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integrated database retrieval system
