Cyclopterus lumpus (lumpfish): 117749526 Help Entry 117749526         CDS       T09199                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism clum  Cyclopterus lumpus (lumpfish) Pathway clum04010   MAPK signaling pathway clum04120   Ubiquitin mediated proteolysis clum04140   Autophagy - animal clum04144   Endocytosis clum04620   Toll-like receptor signaling pathway clum04621   NOD-like receptor signaling pathway clum04622   RIG-I-like receptor signaling pathway clum05132   Salmonella infection clum05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:clum00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     117749526 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     117749526 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     117749526 (traf6)    04140 Autophagy - animal     117749526 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     117749526 (traf6)    04621 NOD-like receptor signaling pathway     117749526 (traf6)    04622 RIG-I-like receptor signaling pathway     117749526 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     117749526 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     117749526 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:clum04131]     117749526 (traf6)    04121 Ubiquitin system [BR:clum04121]     117749526 (traf6) Enzymes [BR:clum01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      117749526 (traf6) Membrane trafficking [BR:clum04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     117749526 (traf6) Ubiquitin system [BR:clum04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     117749526 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 DM TRAF6_Z2 RING_XB3-XBAT31 TRAF3_RING zf-RING_11 U-box zf-TRAF_2 DUF7310 Motif Other DBs NCBI-GeneID:  117749526 NCBI-ProteinID:  XP_034416034 Ensembl:  ENSCLMG00005000677 UniProt:  A0A8C2W9B4 LinkDB All DBs Position 3:26740315..26746425 Genome browser AA seq 582 aa AA seqDB search MASFEGNKGSLQEDSYEGAVGGELSGCALAMLEKERESLLSPAESPGAAFNSSGGGGGSG SSTGLQAAVPLQGYDVEFDPPLERKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDAG QRCPVDNVPLLEDQLFPDNFAKREILSLTVCCPNSDCDEKMELRQLENHLARCEFATVPC SQCQQSVRQSHLEEHKTVECQRRSMTCPDCVAHFYYEERELHEQQCPFASVTCQYCEMDL IRDQIESHCDTDCPKAPVACNFSAFGCKERMQRHDLAEHMQEFTQMHMRSMAEFLRGLSL NGTAPKSLWTPGPSVSPEDQGAGVACGGPKGAASIGGGGGGGGGCAPSQPTKELQRLREM DGRLVKQDHQLRELIILKETQAGQLAELRRRVSTLEETVKDLESQQCQGVFVWRLRGFSA HLHNQEAGLPVVEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNFISLFVHTMQGAFDGQL SWPFQGTIRLAILDQGPEAQHHVEAMETKPDLQAFQKPVIQRNPKGFGYVTFLHLQQLSQ RAFVKDDTLLIRCEVTPRFDSAFHRDGMTVQPRGPESSVSRD NT seq 1749 nt NT seq  +upstreamnt  +downstreamnt atggcttcctttgaaggcaacaaggggagtctgcaggaggacagctatgagggagccgtc ggcggagagctgtccggctgcgcgttggcgatgctggaaaaggaacgggaatccctcctc agcccggcggagagccccggtgccgccttcaacagcagcggcggcggcggtggtagcggt tcctccaccggccttcaggccgctgtccccctccagggctacgatgtggagttcgatccc ccgctggagagaaaatacgagtgccccatctgcctcatggctctgaggaacgccatccaa acgccctgcggtcaccgcttctgcaagaactgcatcgagaagtctattcgtgacgcaggg cagaggtgtcccgtggacaacgtgccgctgttggaagaccagctgttcccggacaacttt gccaaacgggagattctgtcgctgaccgtttgctgtccgaactccgactgcgatgagaaa atggagctccggcaattggagaatcatctggcccgctgtgagttcgccacggtgccgtgc tcccagtgccagcagtcggtgagacagagccatctcgaggagcacaaaaccgtggagtgc caaaggagatccatgacctgtccggattgcgtggcgcacttctactacgaggagagggag ctccacgagcagcagtgtcccttcgccagcgtgacgtgccagtactgcgagatggatctc atcagagaccagatcgaatctcattgtgacacagactgtccgaaagcgcccgtcgcctgc aacttcagcgccttcgggtgtaaggaaaggatgcagcgccacgacctggctgagcacatg caggagttcacgcagatgcacatgcgctccatggccgagttcctgcgcggcctcagcctc aacggcaccgcgcccaagtccctgtggacgccggggccgtccgtttctcccgaggatcag ggggcgggggtggcctgcggcggccccaaaggagccgcgagcatcggcggcggcggcggc ggcggcggcggctgtgcgccaagtcagccgactaaggagctccagaggctcagggagatg gacgggcggctggtgaagcaggatcaccagctgcgtgagctcatcatcttaaaggaaacg caggccggccagctggcggagctcaggcgccgggtgtcgacgctggaggagaccgtgaag gacctggagtcccagcagtgccagggcgtcttcgtctggcgcctccggggtttctccgcc cacctgcacaaccaggaagcgggcctgccggtggtggagcacagccccggcttctacacg ggccgcccgggctacaagctgtgcctgcgcctgcacctgcagacgcccaacgcgccgcgc tgctccaacttcatctccctcttcgtccacaccatgcagggcgccttcgacgggcagctg agctggccgttccagggcaccatccgcctcgccatcctggaccagggccccgaggcgcag caccacgtcgaggccatggagaccaaacccgacctgcaggccttccagaagcccgtcatc cagcgcaaccccaaggggttcggctacgtcaccttcctgcacctgcagcagctgagccag agggccttcgtgaaggacgacacgctgctcatccgctgcgaggtgacgccgcgcttcgac agcgcgtttcaccgcgacgggatgacggtgcagcccagagggcccgaatcctcggtatcg agggactaa

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