Cyclopterus lumpus (lumpfish): 117749567
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Entry
117749567 CDS
T09199
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00052
Galactose metabolism
clum00510
N-Glycan biosynthesis
clum00513
Various types of N-glycan biosynthesis
clum00514
Other types of O-glycan biosynthesis
clum00515
Mannose type O-glycan biosynthesis
clum00533
Glycosaminoglycan biosynthesis - keratan sulfate
clum00601
Glycosphingolipid biosynthesis - lacto and neolacto series
clum01100
Metabolic pathways
Module
clum_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
clum_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
117749567
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
117749567
00513 Various types of N-glycan biosynthesis
117749567
00515 Mannose type O-glycan biosynthesis
117749567
00514 Other types of O-glycan biosynthesis
117749567
00533 Glycosaminoglycan biosynthesis - keratan sulfate
117749567
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
117749567
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117749567
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117749567
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117749567
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
117749567
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
117749567
2.4.1.90 N-acetyllactosamine synthase
117749567
Glycosyltransferases [BR:
clum01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
117749567
Membrane trafficking [BR:
clum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117749567
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of breast milk
117749567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
CHGN
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
117749567
NCBI-ProteinID:
XP_034416089
Ensembl:
ENSCLMG00005019058
LinkDB
All DBs
Position
20:12147401..12149441
Genome browser
AA seq
350 aa
AA seq
DB search
MMRSNFIGLTLFSVTCFVLLLFYNKEGTLYISSKQYNIANGNDTLSRLITEHAQMKTNVL
NGSHEETRRPPTKSKTLGRCPDTPPTLVGPLHVEFDSQRTLDDVREMISSSLREGGRYKP
PDCVAQQKVAIIIAFRNRHEHLTHWLYYLHPILIRQQLDYTVYVINQDGEGVFNRAKLMN
AGYVEAMKQYDHDCFVFSDIDLVPLDDRNLYRCFDNPRHLAVAMDKFNFHLPYKTYFGGV
SSLSKGQYLKINGFPNTFWGWGGEDDDIYNRIIFRGMSISRPDSVTGKYRMIKHKRDLHN
EENPKNAGKLRQTKQTMNKDGLSSLKYTVKEIKKDILYTFINVDIEAPLK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaagcaattttattggactgacacttttcagcgtgacttgttttgttctgctt
ttattttacaacaaagagggcactttatacatttcgtcgaagcaatataatattgcaaat
ggaaacgacaccctttcccggttgataacagaacatgctcaaatgaagaccaacgtccta
aatggcagtcacgaagagacacggaggccacccacaaagagcaagactttgggacgctgc
cctgacacccctccaacacttgtgggtccactccatgtggagtttgattctcaacggact
ttggacgacgtgagagagatgatcagttcttctcttcgggagggaggacggtataagccg
ccagactgtgttgcccaacagaaggtggcgatcatcatcgcatttcgcaatcggcacgag
caccttactcattggctgtattacctccatcctatattgatacgacagcagttggactac
acagtgtacgtcatcaaccaggatggagaaggcgtgttcaaccgggctaaactgatgaat
gcaggctacgtggaagcaatgaagcaatatgaccacgactgctttgtcttctcggacata
gatttggtccctctggatgaccgtaacctttatagatgttttgacaatcctcgacacttg
gctgtggctatggacaaattcaacttccatttaccctataaaacttactttggtggagtt
tcctcattgtctaagggccaatacttaaagattaacggcttcccgaacacgttctggggc
tgggggggtgaagacgacgatatctataaccgaatcatcttccgtggcatgtccatttct
cgaccggactcagtgacgggaaagtacaggatgatcaaacataagagagacttgcacaat
gaggagaatccaaagaatgctggtaaactgcgccaaaccaagcagaccatgaataaagat
ggactcagttctctcaaatacacagtgaaggagattaagaaggatatactgtacactttt
atcaatgtggatattgaggctccgcttaaatga
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