Cyclopterus lumpus (lumpfish): 117749817
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Entry
117749817 CDS
T09199
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117749817 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
clum04050
]
117749817 (tnfrsf11a)
04090 CD molecules [BR:
clum04090
]
117749817 (tnfrsf11a)
Cytokine receptors [BR:
clum04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117749817 (tnfrsf11a)
CD molecules [BR:
clum04090
]
Proteins
117749817 (tnfrsf11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
FBPase_3
Motif
Other DBs
NCBI-GeneID:
117749817
NCBI-ProteinID:
XP_034416483
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Position
20:complement(11631267..11643960)
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AA seq
622 aa
AA seq
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MRSNTSTSWRVRGWITCVLVTFYAQNAVSKSLRCNETHYLLGSRCCKKCQPGFRLFSECT
NSKPTICNKCNPGEYQPGWTREDQCRLQKRCDPVKGFMERPENLVAEEPCRCHSSLQCYH
INCEYCEKIPICSPGHGLEVDLESSNGRQTCVACKKGFFSADNSAEKCKQWTNCKAKDKR
ETQPGTAQADAVCGPFISGAASSWVVVSVLSVITVLCLLILLLFCYKDKLKLLSVNLRSC
VQNLKRTRIQQETLAPLYHSGAGGGLGGGPKYIPCETTKLICQAPHSPADEHPCTFPTSV
PDVKVSLPLTGERTEEEGTKGKIVMEDQSEGPGEPEEVSEEEEVASVSPLLAGSCVCVIP
VHEPLEVGDNEDCSQAVSPGTPGTCSCRGLDGDESGKEERIGSVRTGGNGENELCLPLSQ
AQIRPEFKLHLTDRSLVKQEELYRLASTDSTSTENGTTSPMTSVSPLMTSSSVGDLYLDK
PTEASSPEQGQGLSWRDGKGIKLSSGELDLECSPESLHSQLTEPTLTSGQVSGSHNTTFI
SSGQVMNFSGDVIVVYVSQTSLGSEGAGQDDAFGSPVQEEANETALFFQSSMRPQGDSIS
QSTLQDETLPVQEVMEERLLRK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgaacacttctacaagttggagagtccgaggctggataacgtgcgtcctcgtc
accttttacgcacagaacgctgtctccaaatctctccggtgtaatgaaacacattattta
ttaggctccaggtgctgcaagaagtgtcaaccaggcttccgtttgttttccgagtgcact
aattccaaaccgactatatgtaataaatgtaatccgggtgaataccagcctggctggact
agagaggaccaatgtcgcctgcagaagcgctgtgacccagttaagggttttatggagagg
cctgaaaaccttgtggcagaggagccatgtcgctgccattccagcctccaatgctaccac
atcaactgtgagtactgtgagaagatacccatctgcagtcctggacatggactcgaggtg
gacctcgagtcttccaatggaaggcagacatgtgtcgcatgtaagaaaggcttcttctct
gctgacaacagtgccgaaaaatgcaaacaatggactaactgcaaggctaaagacaagagg
gaaacacagccaggcaccgctcaggctgatgcagtgtgtggaccatttatttctggtgca
gcatcctcctgggttgtagtgtccgtgctgtcagtcatcacagttctctgcctcctcatc
ctgctcctcttctgctacaaagacaaactgaaattactctctgtaaatctgcgatcctgt
gtccagaatctgaagaggactaggatacaacaggagaccttggcccctctttaccacagt
ggagccggaggaggattaggaggtggccccaaatatataccatgtgagacgaccaaactc
atctgccaagcaccccacagccccgccgatgagcacccatgcacctttccaacatccgtt
cccgatgtcaaggtctcactgcccttaacgggggaaaggacggaggaagaagggaccaag
gggaagatagtgatggaggatcagagtgaagggcccggagaacccgaggaggtgtcagaa
gaagaggaggttgcgagtgtgtctcctcttttggcaggttcttgtgtgtgtgtcattcct
gtccatgagccattggaagtaggggataatgaggactgtagccaggctgtcagccccggg
actccaggaacctgctcatgcagagggctggatggagatgaaagtgggaaagaagagaga
attgggagtgtcaggacaggcggtaatggagaaaatgaactctgcctgccgctgtctcaa
gctcagataagaccagagttcaaacttcacctgactgacaggtcactggtaaagcaggag
gaattgtacagactggcaagcacagactccacctcgacagagaacggtacaacctctccg
atgacctcggtcagccccttgatgacttcctcatctgttggagatctctacctggacaag
cccactgaggcctcgagcccggagcaaggtcagggactttcctggagggatggcaaggga
atcaaactctcttctggagagttagatcttgagtgttcacctgagagcctccatagtcag
ctgactgaaccaactcttacctcaggtcaggtgtctgggagccacaacaccacctttatc
tccagcggtcaggtgatgaacttcagcggcgatgtcatagtcgtctatgtcagccagacg
tctctcggtagcgaaggggcgggtcaggatgatgccttcgggagccctgtccaggaagag
gccaatgagacggctctgtttttccagagcagcatgaggccacaaggggactccattagt
caaagcaccttgcaagacgagacactgccagtccaggaagtgatggaggagcggctgctg
aggaagtga
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