KEGG   Cyclopterus lumpus (lumpfish): 117749817
Entry
117749817         CDS       T09199                                 
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
  KO
K05147  tumor necrosis factor receptor superfamily member 11A
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04060  Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117749817 (tnfrsf11a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:clum04050]
    117749817 (tnfrsf11a)
   04090 CD molecules [BR:clum04090]
    117749817 (tnfrsf11a)
Cytokine receptors [BR:clum04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   117749817 (tnfrsf11a)
CD molecules [BR:clum04090]
 Proteins
  117749817 (tnfrsf11a)
SSDB
Motif
Pfam: TNFR_c6 FBPase_3
Other DBs
NCBI-GeneID: 117749817
NCBI-ProteinID: XP_034416483
LinkDB
Position
20:complement(11631267..11643960)
AA seq 622 aa
MRSNTSTSWRVRGWITCVLVTFYAQNAVSKSLRCNETHYLLGSRCCKKCQPGFRLFSECT
NSKPTICNKCNPGEYQPGWTREDQCRLQKRCDPVKGFMERPENLVAEEPCRCHSSLQCYH
INCEYCEKIPICSPGHGLEVDLESSNGRQTCVACKKGFFSADNSAEKCKQWTNCKAKDKR
ETQPGTAQADAVCGPFISGAASSWVVVSVLSVITVLCLLILLLFCYKDKLKLLSVNLRSC
VQNLKRTRIQQETLAPLYHSGAGGGLGGGPKYIPCETTKLICQAPHSPADEHPCTFPTSV
PDVKVSLPLTGERTEEEGTKGKIVMEDQSEGPGEPEEVSEEEEVASVSPLLAGSCVCVIP
VHEPLEVGDNEDCSQAVSPGTPGTCSCRGLDGDESGKEERIGSVRTGGNGENELCLPLSQ
AQIRPEFKLHLTDRSLVKQEELYRLASTDSTSTENGTTSPMTSVSPLMTSSSVGDLYLDK
PTEASSPEQGQGLSWRDGKGIKLSSGELDLECSPESLHSQLTEPTLTSGQVSGSHNTTFI
SSGQVMNFSGDVIVVYVSQTSLGSEGAGQDDAFGSPVQEEANETALFFQSSMRPQGDSIS
QSTLQDETLPVQEVMEERLLRK
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgagatcgaacacttctacaagttggagagtccgaggctggataacgtgcgtcctcgtc
accttttacgcacagaacgctgtctccaaatctctccggtgtaatgaaacacattattta
ttaggctccaggtgctgcaagaagtgtcaaccaggcttccgtttgttttccgagtgcact
aattccaaaccgactatatgtaataaatgtaatccgggtgaataccagcctggctggact
agagaggaccaatgtcgcctgcagaagcgctgtgacccagttaagggttttatggagagg
cctgaaaaccttgtggcagaggagccatgtcgctgccattccagcctccaatgctaccac
atcaactgtgagtactgtgagaagatacccatctgcagtcctggacatggactcgaggtg
gacctcgagtcttccaatggaaggcagacatgtgtcgcatgtaagaaaggcttcttctct
gctgacaacagtgccgaaaaatgcaaacaatggactaactgcaaggctaaagacaagagg
gaaacacagccaggcaccgctcaggctgatgcagtgtgtggaccatttatttctggtgca
gcatcctcctgggttgtagtgtccgtgctgtcagtcatcacagttctctgcctcctcatc
ctgctcctcttctgctacaaagacaaactgaaattactctctgtaaatctgcgatcctgt
gtccagaatctgaagaggactaggatacaacaggagaccttggcccctctttaccacagt
ggagccggaggaggattaggaggtggccccaaatatataccatgtgagacgaccaaactc
atctgccaagcaccccacagccccgccgatgagcacccatgcacctttccaacatccgtt
cccgatgtcaaggtctcactgcccttaacgggggaaaggacggaggaagaagggaccaag
gggaagatagtgatggaggatcagagtgaagggcccggagaacccgaggaggtgtcagaa
gaagaggaggttgcgagtgtgtctcctcttttggcaggttcttgtgtgtgtgtcattcct
gtccatgagccattggaagtaggggataatgaggactgtagccaggctgtcagccccggg
actccaggaacctgctcatgcagagggctggatggagatgaaagtgggaaagaagagaga
attgggagtgtcaggacaggcggtaatggagaaaatgaactctgcctgccgctgtctcaa
gctcagataagaccagagttcaaacttcacctgactgacaggtcactggtaaagcaggag
gaattgtacagactggcaagcacagactccacctcgacagagaacggtacaacctctccg
atgacctcggtcagccccttgatgacttcctcatctgttggagatctctacctggacaag
cccactgaggcctcgagcccggagcaaggtcagggactttcctggagggatggcaaggga
atcaaactctcttctggagagttagatcttgagtgttcacctgagagcctccatagtcag
ctgactgaaccaactcttacctcaggtcaggtgtctgggagccacaacaccacctttatc
tccagcggtcaggtgatgaacttcagcggcgatgtcatagtcgtctatgtcagccagacg
tctctcggtagcgaaggggcgggtcaggatgatgccttcgggagccctgtccaggaagag
gccaatgagacggctctgtttttccagagcagcatgaggccacaaggggactccattagt
caaagcaccttgcaagacgagacactgccagtccaggaagtgatggaggagcggctgctg
aggaagtga

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