Cyclopterus lumpus (lumpfish): 117750938
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Entry
117750938 CDS
T09199
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a
KO
K16798
zinc finger protein GLI2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117750938 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117750938 (gli2a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
117750938 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
AAA_lid_2
Zf-C2H2_ZNF451_C
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
117750938
NCBI-ProteinID:
XP_034418291
Ensembl:
ENSCLMG00005002836
LinkDB
All DBs
Position
21:complement(23520618..23582769)
Genome browser
AA seq
1510 aa
AA seq
DB search
METSAPTATEKKECKGSGLDASSFSEIPKKPSPTILTRGPHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHAMHGHPGLTGSPVISDISLIRLSPHAVPGTGESPFSPPHPYVSPHMEHYL
RSVHGSPTLSMISAARGLSPAEVTHEHLKERALFSLPPPPPGANPTEYYHLMASASQRSP
YGDLLMQSSAAAAAAAHLPEYISPVDVSRFSSPRLTPRLSRKRALSISPLSDASIDLQTM
IRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPSFSFPHPINPVAYQHLLSQQRSLNA
FGHTPPLIQPSASSFSSRQHPLTASPMTTSHNSSNSEANQNASGDPAVSSTVNPLTTKRS
KVKTEAEGPLPISPSSQDHCGGILDLSEDLDKDECKQEPEAIYETNCHWEGCTKEYDTQD
QLVHHINNDHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCSFEGCAK
AYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIAGCT
KRYTDPSSLRKHVKTVHGPDAHVTKKQRSDAPPRPQPPKGNGENEANSKIGARGADGRIE
ANSTSRGVEDCLQVKSIKTENSMTYQSSPGGHSSCSSEPSPLSSANNNDSGVEMALHSGG
SFGDLSTQDDCPMVDSTVTAGGQQAGVGLQLRKAVGHGGAVTIKLENIKKERLKTVRDSC
PWVNSAPQPLQGQRNSMKLPPIPAVGSLLENSNVISNLSGPYPGQRMGDLSSCEITLLNQ
LNERRDSTTSTMSSAYTMSRRSSGISPCYSSRRSSEASQFGANRHNNISSADSYDPISTD
LSRRSSEASHCGGGGVSGGGGGGLPSILSLTPAQHYRLKAKYAAAIGGAPPTPLPNMDRM
SLRTRMALYSDSQEGMSHPFHQPHPGTVPRRCSDVGYGTRSMMPHEVPSSLPRRASDPVR
RPTLDPLSFPRVQRYHSTNSMNPMNGPSAERHQALAMQGYTRSDGSLQRYPFAPRPPSIS
ENVAMENMAVDGMMIGGEQGGEEDMVLPDDVVQYLRSQNSGPSGHNLGQVDYHSNNQTKG
YQTSMAPPASFYAQRRMAMADATMSGQDMQSCQMGPGGSHPSFSAPPSNINKNNMPVQWN
EVSSGTVDTTNKLSKQQQHPLRGNLAVVQQRHNFGSFQGQGQGLGSNQQVVPMSQNMSMQ
GYDNHINQRPINISHQQPQQQRQCTTANFSEQMSPQQGFGQEAIPNSISGSTSVRPTRSN
MAVPELQSCRARTQDEGYSHDQQQHFSVVSQQHSIHNGGRGMLQPRPPIEPKSFARQQTG
SSMMQPSRIPKSSDLNPSCGTDTSEASPKRPSGSAAHNSNSANPNSAVLYTGQIHIFEPT
SASSDAPMSPSASQAPASDTTAAANMASPGVNHVSSSTVDSSTSRSGGTEHAQIDFDTML
DDGDHSSLMSGTLSPGLLQSLSQSSSRLTTPRNSVTLPSVPAGIGNMAIGDMNSMLTALA
EESKFLNMIS
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggagacttcagcgccaacagccactgagaagaaggagtgtaagggttcaggtctggac
gcgagcagcttctcagagatcccaaagaagccctcgcccaccattctgaccagaggtcca
caccacctcttccccacgtttcacacgcccatccccatcgacatgagacaccacgaaggg
cgataccattacgagccacacccactccacgccatgcatggacatcctggactgacgggc
agtccagtcatctcagacatttccctgatccgtctatctccccatgcggtgcccgggacg
ggtgagtcaccgttcagccctccacatccttacgtcagcccccacatggagcactaccta
cgctcggtacacggcagccccaccctttctatgatctcagcggccagaggactgagccct
gctgaagtgactcacgaacacctgaaagaacgcgccctttttagtctccctcctccacca
ccaggggccaacccaacagagtactaccacctgatggccagtgccagccagcgaagcccc
tacggggacctgctgatgcagagcagtgcagcggcggcagcagcagctcatctcccagaa
tacatcagccccgtggatgtttcccgtttctccagcccccggctgactccccgactgagc
aggaagagggctctgtctatctccccgctgtcagacgccagcattgacctgcagaccatg
atccgcacctcacccaactccctggtggcctacatcaacaactcccgctccagctcggcc
gccagcagctcgtatgggcacctttcagtcggagggatcagtccctcgttcagcttccct
catcccatcaaccctgtggcgtaccagcacctgttgtcccagcagaggagtctcaacgcc
ttcggccacactcctcctctcattcaaccgtcagcgtcctctttctcttcccgccaacac
cccctcactgcttcacctatgaccacctcccacaacagctccaactctgaagcaaaccag
aatgccagtggagacccagcagtaagtagcacagtcaacccattgaccaccaagaggtca
aaggttaagacggaggcagagggtccgctgcccatctcaccatcctctcaggaccactgt
ggggggatcttggacctgagtgaggacctggataaagacgagtgcaaacaggagcccgag
gctatatacgagaccaactgccactgggagggctgtaccaaggagtatgacacccaggac
cagcttgttcatcacatcaacaacgaccacatccacggtgagaagaaagagtttgtgtgc
cgctgggaggagtgttcacgagagcagaagcccttcaaggcccagtacatgctggtggtc
cacatgaggcgtcacacgggggagaagccgcataaatgcagctttgagggctgtgcaaag
gcctactcccgcttggagaacctcaagacccacctcaggtctcacaccggggagaagccg
tatgtgtgtgaacacgagggctgcaacaaggccttctccaacgcctcagatcgggccaag
caccagaaccgcacacactccaatgagaaaccatatgtgtgtaagattgcgggctgtacc
aagcgctacacagaccccagctctctcaggaagcacgttaagacagtccacggacccgac
gcccacgtcaccaagaaacagcgaagcgacgcaccaccgagaccgcagccgcccaaagga
aacggcgagaacgaggcaaattccaagattggtgcaagaggcgcggacggcaggattgag
gccaacagcacctctcgaggagtggaagactgcctccaagtcaaatctatcaagaccgag
aactctatgacatatcagtccagtcctggtggccactcgtcgtgtagcagtgagccgtcg
cctcttagcagcgccaacaacaacgacagtggagtagagatggccctgcacagcgggggc
agcttcggggacctcagcactcaggacgactgccccatggttgactccactgttaccgcc
ggggggcagcaggctggggtggggctacagttgaggaaagctgtgggtcatggcggcgcg
gtcaccatcaagctggagaacatcaaaaaggaaaggctgaagacagtgagggactcctgc
ccctgggtcaactcggcaccacagccactgcagggtcaacgaaacagcatgaagctgcct
cccatacctgcagtcggttccctgctggagaactccaacgtgatcagcaacctaagcggt
ccgtaccctggccaacgcatgggggacctgtcctcatgtgagataacactgctgaaccag
ctgaatgagcgtcgtgatagcaccaccagcaccatgagctcagcttacaccatgagtcgc
cgctcctctggtatttcaccgtgctactccagccgccgctccagtgaggcgtcccagttt
ggtgctaaccgccacaacaatatcagttcggctgactcctatgacccaatctccaccgat
ctgtctcgccgctccagcgaggccagccactgtggaggtggtggtgtcagtggaggaggc
ggaggaggtctccccagcatccttagtctgacaccagctcagcattatcgacttaaggca
aagtatgctgctgccattggtggagctccacctactcctctccccaatatggatcgaatg
agcctgaggacacgcatggcactctacagtgactcccaggaaggcatgtcgcacccattc
catcagccacaccctggaactgtgcctcggcgatgcagtgatgtaggatatggcacacgg
agcatgatgccccatgaggtacccagcagccttccacgtcgtgccagtgatccagtgcgt
cgtccgactctggaccctctgtcttttcctagggttcagcgctatcacagcacgaacagc
atgaaccccatgaatggtccatcagctgaacgccaccaggctctggccatgcagggctac
actcgctccgatggcagcctgcaacgctacccatttgcccccagaccacccagcatttct
gagaatgtagccatggaaaacatggcagtggatggcatgatgatcgggggggagcagggt
ggagaggaggacatggtgcttccagatgatgtggtgcagtaccttaggtcccagaattct
ggcccttcaggtcacaacttggggcaagtggactaccattccaacaatcagactaagggc
tatcaaacaagcatggccccaccggcatcattttatgctcagaggaggatggccatggca
gatgccaccatgtctggtcaggacatgcaatcttgccagatgggacccggtggctcccat
ccgtccttctcagcaccacccagcaatattaacaagaacaacatgccggtgcaatggaac
gaggtgagctcaggtactgtggataccactaacaagctctccaaacaacaacagcatcct
ctgagagggaacctagctgttgttcagcagaggcataattttggttccttccagggacaa
ggtcagggcctgggcagcaatcagcaggtagtgcctatgagtcagaatatgtctatgcag
gggtatgacaaccacatcaaccagaggccgattaacatctcccaccagcagcctcagcaa
cagaggcaatgcaccactgcaaactttagtgagcaaatgagtcctcagcaagggtttggc
caagaggcaatcccaaattctatatctgggagcacgagcgtgagacctacccggagtaat
atggcagttccagaactgcaaagttgcagagcaaggacacaggatgaagggtattctcat
gatcagcagcaacatttcagtgttgtctctcagcaacacagtatccacaatggaggcaga
ggaatgttacaacccaggcctcccatagaacccaagtcttttgccagacaacagactggt
tctagcatgatgcaaccaagccggatacccaagtcatctgatttgaaccctagttgtggt
actgacacctcagaggcgagcccaaagaggccaagtggctcagcagctcacaacagcaac
tctgcaaatccaaactctgctgtgctctacacgggtcagattcatatttttgagccaact
tcagccagctctgatgcccccatgtcccccagtgctagtcaggctcctgccagcgacacc
actgctgcagccaacatggcctccccaggagtcaaccacgtctccagcagtactgtggat
tcttccactagcagatccggtggcacggagcatgcccagattgattttgacaccatgcta
gatgatggggaccactccagcctaatgtcaggcaccctgagtcccggcctcctgcagagc
ctctctcagagttcctcacgtctcacaaccccccgcaactctgtcaccctcccgtctgta
ccggcagggattggcaacatggccatcggtgacatgaactctatgctcacagccttggct
gaagaaagcaagttcctcaacatgataagctga
DBGET
integrated database retrieval system