Cyclopterus lumpus (lumpfish): 117751250
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Entry
117751250 CDS
T09199
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04620
Toll-like receptor signaling pathway
clum04621
NOD-like receptor signaling pathway
clum04622
RIG-I-like receptor signaling pathway
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117751250 (traf3)
04621 NOD-like receptor signaling pathway
117751250 (traf3)
04622 RIG-I-like receptor signaling pathway
117751250 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117751250 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
ATG16
zf-C3HC4_2
zf-C3HC4
zf-TRAF_2
DUF4201
Sina_ZnF
Baculo_PEP_C
MctB
AAA_13
ATG17_like
DASH_Dad2
Fzo_mitofusin
EzrA
Synaptobrevin
DUF1664
DUF724
GAS
Exonuc_VII_L
Fez1
Motif
Other DBs
NCBI-GeneID:
117751250
NCBI-ProteinID:
XP_034418848
Ensembl:
ENSCLMG00005015744
LinkDB
All DBs
Position
22:23640803..23660307
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AA seq
595 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLTTPLSVAPPIIPPSHRQVNPWPPNDSTTSQGVPAGFL
PLHGGFRDHFVLTPEAKYCCETCRLVLCQARQTECGHRFCQSCINDILSHPNPVCPADME
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRESSCEFCMTKMPLTDLQKHKETVCPAFPVSCPNHCSFSSLP
RSELSSHQNDCPKAQVSCQFHRYGCTFKGLNQDMRQHESTLAAEHLRMMANRNSSLENKV
EDIKGELLERYKVLPALSSRLSELENQSDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRVLRDEVENLRGTLENVRTRLNTLEQGGRSGTGSTTHTLASLENQLKRHDEMLS
VHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVGAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQTVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctgaccacgcctctctcagtggctccacccatcatcccgccctctcaccgtcaa
gtcaatccctggcctcccaacgactccaccacttcacaaggtgtccctgcaggttttttg
cctcttcacggaggattcagagatcactttgtattaactccagaagccaaatactgctgc
gaaacctgcagactggtcttgtgtcaagcccgccagaccgagtgtggacaccgcttttgt
cagagctgcatcaacgacatcctcagtcatccaaacccggtatgtccagctgacatggag
cctctgttcaaagacaagatctttagagacgtttgctgccatcgtgagatcatggcactg
aaagtttactgtcgcagtgaagctaacggctgtcaggagcagatgagtctgcagcagata
cctgaccacctgaatgtgtgtccgttcttcgaggttccttgtccgttgggtaaatgtaaa
gagcgaatgatgaggaaagagattcccgaccacctgagctggaaatgtaaacacagagag
agcagctgcgagttctgcatgaccaagatgcccctaaccgacctgcagaaacacaaagag
acggtgtgtccagcgttcccagtgtcgtgtccaaaccactgctccttttcctcccttccc
cggagtgagctgtcgagccaccagaatgactgtcccaaagctcaggtgagctgtcagttc
caccgctacggctgcaccttcaagggtttgaaccaggacatgaggcaacatgagtccacc
ttggcagctgaacacctgagaatgatggccaacagaaactccagcttagagaacaaggtc
gaggatattaaaggtgagctgttggagaggtataaggtgcttcctgctctcagcagtcga
ctgtctgaactggagaaccagagcgacgagctgagagagaagaaccgacagatggagcag
aaactggccaccatgcagaaactaatgagctctcactcagagaagctactggaggtggag
ctggagcttcgttcccttcgtgtgctcagagatgaggttgagaacctgaggggaacgctg
gagaacgtccggacgagactcaacactctagaacaagggggacggagcgggactggatcc
acaactcacactctggcatccctggagaatcagctgaagcgacatgatgagatgctgagt
gtccatgaaatccgattagccgacatggacctgcgtttccaggtgctagagacggcaagt
tataatgggaccctgatctggaagatccgcgactacaagagaaggaaacaggaagcggtg
ggggcgaagacactgtcgctgtactcacagccattttacaccggatactttgggtacaag
atgtgcgcccgtgtctacctgaacggcgacggcatgggcaaggggacgcacctgtctctg
ttcttcgtggtgatgagaggcgagtacgatgccctgctgccctggcctttcaaacagaag
gtgactttgatgctgatggaccagggtccgtcgaggaaacacttgggggatgcctttaag
cctgatccaaatagtagcagcttcagacgtcctgcagcagagatgaacattgcttctggc
tgtcctctgtttgtttctcagaccgtcctggagactggcagctacatcaaagacgacacc
atcttcatcaaggttacagtagatacctctgaccttcctgacccgtga
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integrated database retrieval system
