Cyclopterus lumpus (lumpfish): 117751392
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Entry
117751392 CDS
T09199
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117751392 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117751392 (c9orf72)
Membrane trafficking [BR:
clum04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
117751392 (c9orf72)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
117751392
NCBI-ProteinID:
XP_034419121
Ensembl:
ENSCLMG00005012256
LinkDB
All DBs
Position
22
Genome browser
AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKSEVAVEGECPLLAATFAYWDNILGPRVRHIWTPKGDQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQA
ELAFYLPLHTICVERLKHVIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKSHSVPEDI
NIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIARTLCLFLTPEE
RKCSRLCKADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHMYNQRRYMRSELSALWKADSEEDIAPDTVIHTDETFTPDLNIFQDVMHKDTLVMS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLNIVMAFAEKLRAGLHSFVFGKPFYTSVHERDALMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctggctgtccaccccagtcgcctgccgtggcgaagtctgaggtggcagtggag
ggagaatgcccgctgctggcagccaccttcgcctactgggacaacatcctgggaccgcgg
gtgcgccacatctggacgccgaagggagaccagctgatgttcctcagcgacggcgaggtc
acgtttttggccaaccacacgctcaacggggagatcctgcgcagcgcagagtgcggcgcc
gtggacgtgaagttcttcgttctggcggaaaagggcgtcatcattgtgtcccttatcttc
gacggcgagctgaagggggacaagaatacgtgcgccttgtccatcatcctcccacaggcg
gagctggccttctacctgcctctgcacaccatctgtgtggagaggctgaagcacgtcatc
cgcaagggacgcatttggatgcagaagggctacaacatcatctcggtgctgagcttggag
attgtccccatcatggagctgttggcctcgatgaagtcgcacagtgtgccagaagacata
aatataaaagacaccgtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaggccatcagctctcatctgcagacctgcggctgctcaatagtagttggaagc
aacccagagaaagtaaataagattgcgcggactctctgcctcttcctcaccccggaggag
aggaagtgctcccgcctctgcaaggctgactcttctttcaaatatgacacgggcctgttt
gtccagggcctgctcaaggactccacgggcagcttcgtcctgcccttccgccaggtgctc
tactcgccgtacccgaccacgcacatcgacgtcgacatcaacacggtcaagcagatgccg
ccgtgccacgagcacatgtacaaccagcggcgctacatgcggtccgagctgagcgccctc
tggaaggcggacagcgaggaggacatcgcccccgacacggtcattcacaccgatgagacc
ttcacgcccgacctgaatatatttcaagacgtcatgcataaagacactttggtgatgtcc
tttatagatgaggtgttcatgctgaagcccggcctgtccctgcggagcacctacctggcc
cagttcctgctgctgctccacaggaaggccctcacgctgctcaagtacatcgaggacgaa
acgcaaaaggggaagaagccctttcgatcgctgcgcaacctgaagacggacctggatctg
acggtggaaggggacctgaacattgtcatggccttcgcggagaagctgcgggcggggctg
cactcgttcgtgttcgggaagccgttctacaccagcgtgcacgagcgagacgcgctcatg
agcttctga
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