Cyclopterus lumpus (lumpfish): 117751424
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Entry
117751424 CDS
T09199
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117751424
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117751424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
117751424
NCBI-ProteinID:
XP_034419174
Ensembl:
ENSCLMG00005016815
LinkDB
All DBs
Position
22:complement(19837537..19854466)
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AA seq
1797 aa
AA seq
DB search
MKRSKHRGHKEDRNGDEPAILETEDLDRMQGMFLGGGPDPDSVSLASVTAVTTNVSNKRS
KPDIKMEPSSGRPVDYQISVTVIEARQLIGLNMDPMVCVEIGEDKKYTSMKESTNCPYYN
EYFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTIYFQPEHQFYHKWAL
LSDPDDISAGCKGYIKCDVAVVAKGDTIKTPHKANESDEDDIEGNLLIPEGVPAERQWAR
YYLKIYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIW
NEQIVFTEMFPPLCKRIKIQIRDSDKVNDVAIGTHFLDLRKISNDGDKGFLPTLGPAWVN
MYGSTRTYTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPEISSATDVQLEGIPN
ISENATGKVEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEIDGAAKPKMKGKKGG
GGDGDEEETELIHNSSDEEMDDDGDLTSVATTPPMKPVVTDRNYFHLPYFERKPCIYIKS
WWQDQRRRLYNANIIDNIADKLEDGLNDVQEIIKTEKTYPERRLRGVLEELSRGCSQFLS
LANQDQNLSGRTKLDRERVKLCMSEVESIGQQAKAMRSQVKKSTVRDKVKLAQNFLTKLR
FLAEEPQHSIPDVFLWMISNGKRIAYARVPSKDILYSPTEEETGKDCGKVKTIFLRIPGK
KGFGPAGWTVQSKIEIYLWLGLTRQRKDYLNGLPNGFEENKLSKGPGMPCSPPISLTYMM
KQIFQLRVHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENV
ELFGEACELRDDPPIIVIEIYDQDTVGKAEFMGRTFAKPVVKMADEHYGPPRFPPQLEYY
QIYRGNCTAGEMLAAFELLQIGPNGKADLPPIDGPTDVDRGPILPVPLGIRPVLSKYRIE
VLFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENE
LLHPPLNIRVVDCRAFGRYTLVGSNAVPSLRKFIYRATDKQANNFSTSEEIIVVNMEAEP
GFKKMDTVVKLDSGSDAVVKVEDDDKDGKGKKKKRKKGDEIEEEELDQSMLDWWSKYFAS
IETFTEALKAQEATLSDSEDKDDMDITDGGDIKPDDSPAKGPKRGKGKKDRKKQTFDPFE
KKKAKLDELKVYPKELESEFDSFEDWLHSFNLFRGKGGDDDDQNVTDDDRIVGKFKGSLC
MYKVSDDMQRDVSFDSSMGMFQNIPHNDPINILVRIYVIRATDLHPADINGKADPYIAIK
LGKTEIKDKENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDL
ENRFYSKHRPTCGITSGYAIHGYNVWRDPMKPSQILARLCKEGKLDGPHYGPGGRVKVEN
RVFMAPTEIEDDNGLKKQTEEHLALTVLKHWEEIPRVGCKLVPEHVETRPLLHPDKPGIE
QGRIEMWVDMFPKDMTAPGPALDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDI
FVRGWLKGQQEDKQDTDVHYHSITGEGNFNWRYVYPFDYLMAEEKIVISKKESMFAWDET
EYKIPARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTIGMVTNEGEMPTVSI
FKQKRIKGWWPFVARNEDDEFELTGKVEAELHLLTGEEAERSPVGEGRNEPEPLEKPNRP
DIALLWFLIPFKAAKNLICDQYRWLTIKILSALLLLAIVALFLYNMPGYMVKKMLGA
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgcggccacaaggaggacagaaacggagatgagccggcgatt
ctggagacggaggacctggatcgcatgcagggcatgttcctgggcggaggccccgatccc
gactccgtctctctggcctccgtcaccgccgtcaccacaaatgtatcaaacaagaggtca
aagccagacataaagatggagcccagttctggacgaccagtagattaccaaatcagcgtg
acggttattgaagccaggcagctgatcgggctgaacatggacccaatggtgtgtgtggag
attggagaagataaaaagtacacctcgatgaaggaatcgaccaactgcccgtactacaac
gaatatttcgtgttcgacttccacgtccctccggatgtcatgttcgacaaaatcctgaag
ttgtctgtcattcactccaaaaaccttctgcgcagcgggacgctggttgggactttcaaa
ctggatgtcgggacaatctacttccagcccgaacatcagttctaccacaagtgggctttg
ttgtccgaccccgatgacatctcagcgggttgcaaaggctacattaagtgtgatgtcgcg
gtcgtggccaaaggagacaccataaagactccgcacaaggccaacgaatcagacgaagat
gacatcgagggcaatctcttgatcccagagggggtgcccgcagagcgacagtgggctcgt
tattacctgaagatctacagagccgagggactccccagaatgaacaccagcatcatggcc
aacgtcaaaaaggccttcataggagagaacaaggacctggtggatccttacgtccaagtt
ctgtttgccgggcagaaagggaagacatccgttcagaagagctgctacgagcccatctgg
aacgagcaaatagttttcaccgagatgttcccgccgctgtgcaagcgcatcaagatccag
atccgcgactcggataaagtgaacgatgtcgccatcggaacccacttcctggacctgcgg
aagatttccaacgacggggacaaaggcttcctgcccacgctggggccggcctgggtcaac
atgtacggctccacgcgtacctacaccctgatggacgagtaccaggagttgaacgagggt
ctcggagagggggtgtccttcagggcccgtctgctcatcagcctgggggtggagatcctg
gacccctcctcgcccgaaatttccagcgccacagacgtgcagctggagggaatacccaac
atctcggagaacgctaccgggaaggttgaggaattcttcctctttgggtctttcctggag
gccacaatgattgacagaaagatcggtgataagcccatcaacttcgaggtcaccataggt
tactatggaaacgagattgacggggctgcaaagccaaaaatgaagggtaagaagggagga
ggaggagacggtgacgaggaggaaaccgaactgatccacaactccagcgatgaggagatg
gacgatgacggggacctgacctcagtggcgactactcctcccatgaaacccgtcgtcacc
gaccgaaactacttccacctgccgtatttcgagaggaagccgtgcatctacatcaagagt
tggtggcaagaccagagaaggaggctgtacaacgccaacatcatagacaacatagcagat
aaactggaggacggactgaacgacgtgcaggagatcatcaagacggagaagacgtacccc
gagcgcagactgagaggcgtcctcgaggaactcagccggggttgcagccagtttctttcg
ctggcaaaccaggaccagaatctgtctggcagaaccaaacttgaccgggagagagtgaag
ctgtgcatgtcagaagtggagagcatcggccagcaagccaaagccatgaggtcccaggtg
aagaagagcacagtgagagataaagtcaagctggctcagaacttcctcaccaagctgcgc
ttcctggctgaagaacctcaacacagcattcccgatgtcttcctgtggatgataagcaat
gggaaacgcatcgcctacgcacgcgttccctccaaagacatcctctactcccccacggag
gaggagaccggaaaggactgcggcaaagtcaagacgatctttctgaggatccccggaaag
aaaggatttgggcccgctggctggacagtccagtccaagatagagatttatctctggctg
ggtctgactagacagcgcaaagactacctgaacggtctgcccaatggctttgaggagaac
aagttgtccaaaggacctggcatgccgtgttcacctcccatcagcctcacctacatgatg
aagcagatcttccagctgagggtccacatgtaccaagctcgcagcctgttcgccgccgac
agcaccggtctgtccgatcccttcgcgagggtcttcttctcgacgcagagccaggtcacg
gaggtgctggctgagactctgtgcccgacgtgggaccagctgctggtcttcgagaacgtg
gagctgttcggggaggcctgcgaactgagagacgaccctcccatcatcgtcattgaaatc
tacgatcaagacacagtgggtaaagctgaattcatgggcagaacttttgccaagcccgtg
gtcaagatggcggacgagcactacggacccccgcggttcccccctcaactggagtactac
cagatctaccgcgggaactgcaccgccggagagatgctggcggccttcgagctgctgcag
atcggccccaatgggaaagccgacctgcctcccatagacggtcccacggatgtggaccgc
ggcccgatcctgccggtcccactggggatccgaccagtgctcagcaaatacagaatcgag
gttttgttctggggcttgagggacctgaagagggtgaatctggcccaggtggatcggcct
cgcgtggacatcgaatgtgccggaaagggcgtgcagtcggccctcatccccaattacaag
aaaaaccccaacttcagcaccctcgtcaagtggttcgaagtggatctgcccgagaacgag
ttgctccacccgccgctgaacatccgagtggtggactgcagggcgttcggccgctacacc
ctggtgggctccaacgccgtgcccagcctgcggaagttcatctacagggcgacggacaag
caggccaataacttttccacctccgaggaaatcattgtcgtcaacatggaagccgagccc
ggttttaagaagatggacacggtggtcaaactagactctggctctgatgctgtggtcaaa
gtggaggacgatgataaggatggaaaggggaaaaagaagaagaggaagaagggcgacgag
atcgaagaggaggaactcgaccagagcatgttggactggtggtccaaatattttgcctcc
attgaaactttcacagaggctctcaaggctcaagaggccactctctcagattcagaggac
aaagatgacatggacattacggatggcggagatatcaaacctgacgactctcccgcgaaa
ggccccaagagagggaaaggaaagaaggacaggaagaagcagacgttcgacccgttcgag
aagaagaaggcgaagctggacgagctgaaggtgtaccccaaagagctggagagtgaattc
gacagcttcgaagactggctccacagcttcaacctgttcaggggcaaaggaggagacgac
gacgaccagaacgtgacggacgacgaccggatcgtcgggaagttcaaaggctctctgtgc
atgtacaaagtgtcggacgacatgcagagagacgtgagcttcgactccagcatgggaatg
tttcagaacatccctcacaacgaccccatcaatatcctcgtccgcatctacgtcatcagg
gccactgatctgcacccggccgacattaacggtaaagctgacccgtacatcgcaatcaaa
ctgggtaagacggagatcaaagacaaagagaactacatctcaaagcagctcaaccctttg
ttcggcaagtcctttgacgtggaggccacgttcccgatggactccactctcaccgtgtcc
atttacgactgggacctggtgggcaccgacgatctgatcggggaaaccaaactggacctc
gagaaccgcttctacagcaagcacagacccacgtgcggaatcacgagcggctacgccatc
catggttacaacgtgtggcgggacccgatgaaaccatcacaaatcctggcccggctttgt
aaggagggcaagctggacgggcctcactacggcccgggaggaagggtgaaggtggagaac
cgggtcttcatggcaccgactgagatagaggacgacaacggtttaaagaagcagacagaa
gaacatctggctctcaccgtgttgaagcactgggaggagatcccacgggtcggctgcaaa
ctggtcccagaacacgtggagaccagaccactgctgcaccccgacaaaccaggaattgaa
caggggagaattgagatgtgggtggacatgttcccgaaggacatgactgcacccggcccc
gctctcgatatttcaccgaggaaaccaaagaagtttgaactgagggtgatcgtctggaac
acggacgaggtcgttctggaggacgatgacatcttcactggcgagaaatccagtgacata
ttcgtgcgaggctggttgaaggggcagcaggaggacaagcaggacaccgacgtccactac
cactccatcaccggggagggcaacttcaactggcgctacgtctaccccttcgactacctc
atggccgaagagaagatcgtcatctcaaaaaaagagtccatgttcgcctgggacgagacc
gagtacaagatcccagctcgtctcaatctgcaagtgtgggacgctgaccatttctctgca
gacgacttcctaggcgccatcgagctggacctcaaccgtttcccccgcggtgcgaagact
gccaagcagtgcaccatagggatggtgaccaatgaaggggagatgcccacggtctccatc
ttcaaacagaagaggatcaaaggctggtggccgttcgtggccagaaacgaagacgacgag
ttcgaactcacgggcaaagtggaagcagagctgcaccttctgaccggagaggaggcggag
aggagcccagttggtgaaggacgcaacgaaccagaaccactggagaaacccaaccgtcca
gacatcgccctcctctggttcctcatcccgttcaaagccgcgaagaacctgatttgtgac
cagtacaggtggctgaccatcaagatcctctctgccctcctgctgctggccatcgtggct
ctcttcctctacaacatgcccggttacatggtgaagaaaatgttgggcgcctga
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integrated database retrieval system
