Colletotrichum lupini: CLUP02_13639
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Entry
CLUP02_13639 CDS
T08561
Name
(RefSeq) elongation factor Tu GTP binding domain-containing protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
clup
Colletotrichum lupini
Pathway
clup03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLUP02_13639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clup03041
]
CLUP02_13639
Spliceosome [BR:
clup03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CLUP02_13639
Complex C
U5 SnRNP specific factors
CLUP02_13639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
EFG_III
GTP_EFTU_D2
EFL1
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
73347587
NCBI-ProteinID:
XP_049149723
UniProt:
A0A9Q8WMB9
LinkDB
All DBs
Position
7:join(2069497..2069516,2069578..2069687,2069765..2071908,2071966..2072053,2072453..2073015)
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AA seq
974 aa
AA seq
DB search
MDDLYDEFGNFIGEDVGSEEASERGAEGDYVYGDDASEAPAPTDDGPSNAIILHEDKQYY
PTAQQVYGDEVEVLVREEDEQLLSQPIIAPVEQKKFNIEEVDLPPVFFERSFMTDLMNFP
DQIRNVALAGHLHHGKTAFMDMLVLETHDITDRLERRVGKKRDEQLRYTDVHVVERERGV
SIKASPMSLVLPSSKGKSHLINILDTPGHVNFVDEVAASLRLADGVCLVVDVVEGVQVNT
EQIIKHAVLEDIPLTLIVNKMDRLILELKLPPKDAYFKLKHVIEEVNTVIENTIPGKGEE
RRISPEKGNVLFACTDMGWCFTLQSFAKMYADTYGGINTEDFAKRLWGDIYFNPEKRNFT
RKPLEPRSSRSFVNFVLEPIYKIFTHTISDSPEELKIVLGSLGITLKPSQYKADAKVLLK
LVCEQFFGPSTGFVDMIVGHIPSPDQSAEKYLEKYYTGPLDTKLAQSMKACNQDGPLVIH
VTKLFSTADAKSFYSFGRVLSGTAHPGSQVRVLGEGYSIDDDEDMAMATISDVFIAESRY
NIPTDGVPAGNFVLLGGVDNSIVKTATLIPPKLEDDEDPYIFKPVTHFTESVLKVAVEPI
NPSELPKMLDGLRKIQKSYPLITTKVEESGEHIVLGTGELYMDCVLHDLRRLYADMEIKI
SDPVTRFCETVVEQSATKCYAITPNKKNKITMVAEQLDKGISEDIESGKVKIKDPIRKTA
KYFEDTYGWDKLAARSIWAFGPDEMGPNILQDDTLPSEVDKKLLTTVKETIRQGFSWATR
EGPLCEEPIRNTKFRITDVSLASEAIFRGGGQIIPTSRRACYSSFLMASPRLMEPLYSVS
VTGPEDSATEVYTTLARRRGHVLQDGPVAGTPLYRVNGLIPVIDSFGFETDLRIKTKGMA
MVSLTFDSWSIVPGDPLDKEVILRPLQPASAQATARDFVLKTRRRKGLSEDVSVATFLEP
EFYQSLMESGALGD
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttatacgacgagttcggtaacttcatcggcgaggatgtcggctctgaagag
gcgtctgaaagaggggcggagggcgattacgtctacggcgatgatgctagcgaggcgccc
gcacccactgatgatggcccatcaaatgcgatcattctgcacgaggacaaacaatactac
ccgacggcacagcaagtatacggagatgaagtcgaagtccttgtacgagaggaagatgag
cagttgctctcgcagccgatcatagcgcccgtcgagcagaagaagttcaacatcgaagag
gtcgacctaccacccgtattctttgagcgcagcttcatgacagacctcatgaacttcccc
gatcaaatacggaatgttgcgttggcaggacacctccatcacggaaagacggcatttatg
gatatgctggtgttggaaacccatgatatcacagacaggctcgagcgccgggtcggcaag
aagagagacgagcagctgagatataccgacgtccacgttgtggaacgggaaagaggcgta
tcgatcaaggcttcgcccatgagcttggttcttccgagttccaaaggaaaatcccatctg
attaacattctggatacccccggccacgtcaactttgttgatgaggtcgcagccagtctg
agattagccgacggagtctgtctggttgtcgacgttgtggagggcgttcaggtcaacacg
gagcaaatcatcaagcatgctgttctggaggatatcccgctgacgctcattgtcaacaag
atggaccgcctcatcttggagctgaagctgccgcccaaggatgcctacttcaagcttaag
cacgtcatcgaggaggtcaacacggtaatcgaaaacactatcccgggcaagggcgaggaa
agacggataagccccgagaagggcaatgttctttttgcttgcacggacatggggtggtgc
ttcaccctgcagtcattcgcgaagatgtacgcagacacgtacggcggcatcaacaccgag
gatttcgcgaagaggttatggggcgatatttacttcaaccccgagaaacgaaacttcacc
cgcaagccgctagagccacgatcgagccgatcctttgtcaacttcgttctggagcctatt
tacaagatctttacgcacacaatcagcgacagcccagaggaattgaagattgtcttgggc
agcctcggcatcaccttgaagccttctcagtacaaggctgacgctaaggtgctgttaaaa
ctggtctgcgagcagttcttcggtccctcaacaggattcgtcgacatgatcgtaggccac
atcccttcacctgaccagtctgcggagaagtacttggaaaagtactacactggccctctg
gatacgaagttggctcagtccatgaaggcttgcaaccaagacggtccgctggtaattcac
gtaacaaaacttttcagcaccgcagacgccaagagcttttattcgtttggtcgcgtgcta
agtggcacagctcatcctggctcgcaagtccgagttcttggagaggggtactcgatagat
gacgacgaagacatggctatggcaacgatttctgacgtcttcatcgcagagtcgaggtat
aacattccgacggacggcgtgccggcgggcaatttcgtactgctcggtggagtcgacaac
tccatcgtcaaaacggcaacactcatcccgccgaagcttgaagatgatgaggatccttac
atctttaagcctgtcacacatttcaccgagtctgtactcaaggtagccgtcgagcccatc
aacccgtcagaattacccaagatgcttgacggtctgcggaaaatccaaaagagctatccg
ctcattactacgaaggttgaggaatcgggagaacacatcgtcttgggcactggcgaattg
tacatggactgtgttctccatgaccttagacgcctctacgccgatatggagattaagatt
tcggatccagtaactcgcttctgcgagacagtcgttgagcagtcagcgaccaaatgctac
gccatcacgccgaacaagaagaacaagattacgatggttgccgagcagctagataagggc
atctcggaagacattgagtcaggcaaggtcaagatcaaggaccctattcgcaagacagcc
aaatacttcgaagacacctatggatgggacaagctggcagcgagaagcatctgggcattt
ggtcccgatgagatgggccctaacattctgcaggacgacacgttgccctcagaggtcgac
aagaagctcttgacgacggtcaaggaaaccattcgccaaggcttcagctgggcaactaga
gaagggcccctgtgcgaagaacccattcgaaatacaaagttcaggatcacggatgtgtcg
ttggcgtcggaagctatcttccggggaggcggtcagatcatccccacttccaggcgggcc
tgctactcttcgttcctgatggcctcccctcgactgatggagcctctgtactctgtctct
gtgactggccctgaggactccgcaacagaggtctatacaacgttggctagacgtcgtggt
cacgtccttcaggatggacctgtggccggcacgcctctctatcgcgtcaacggtctgatt
cctgtcatcgactcctttggcttcgaaacggacctgcgcatcaagaccaagggcatggcc
atggtcagcttgacgtttgacagttggagcattgtgccaggtgatcctctcgacaaggag
gttattctgcggccgctgcagccggcaagtgcacaagccacggccagagactttgtgctg
aagacgagaaggagaaagggtctcagcgaggacgtgagcgtggcaacattcctggagcct
gagttctaccaaagcctcatggagagtggcgctcttggcgactaa
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