Clavispora lusitaniae CBS 6936: A9F13_07g02629
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Entry
A9F13_07g02629 CDS
T05147
Name
(GenBank) putative U5 snRNP GTPase
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A9F13_07g02629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clus03041
]
A9F13_07g02629
Spliceosome [BR:
clus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
A9F13_07g02629
Complex C
U5 SnRNP specific factors
A9F13_07g02629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
EFTUD2
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_III
TniB
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
OVF08785
UniProt:
A0AA91Q071
LinkDB
All DBs
AA seq
976 aa
AA seq
DB search
MDSDDDLYDEFGNFIGNPENSDAESMNQTSKQGNNKDEHSDSSMDEDEAPKESEETSMIK
KEFSDTHTFETIVVDPTHQGDEQPIIKPIADQKLYIEYAKTVDSSDLPEVTYSRDYMKSL
LKDIPERIRNFAIVGSLHTGKTSLVDRLVLETHPTIDEGKQNLQEFKSLRYLDSHRLEKE
RGISIGASLLTLLCPDSRDRSHVLNIIDCPGHPDFLDDTSAALSVVEGAVLVLDLLEGFT
KKDKRIVTHLIKKNLPFVVVLNKFDRLILELRLPPREFFHKVRYVLDDINSFIHHNEFIS
TYTHEKLVSPLKNNVVFSSSILSTTFSLRSFSKLYCDNQQFAKDLDQKQLERLLWGEISF
DENKKQFFVLNEDAVLDSKRTFEMFILDPLYKLVTYTLTSDGNGHRLSKLLWDNFKVTLQ
KSAYKKDPQILLKIVFGSVFGSTQALVDSITTALPGPEKNAECLLKRGLDLRDEYSSELV
AEVFKTQLTSDTKGFVSFIRIHQGSLKEGQRVRIVGDNHIDDRKDDVICEVGEIYLAGGR
YKVPYEEASAGSIVIVTGINEAIQKCATVLGQSIPKSLVKPIHWAESERRAVYKVAVEPE
KPSELPRLVDGLKQLSRTYLSAVVRLEESGEHVILAPGELYMDCFLHDLRYLFDDYFSIK
VSDPMVKFSETCAERSVTKIDTYASSKKSQISITSEPFNDTKVSQAIQEGKISLAQPSKV
TSKTLRTEYGWDSLSARSLWCFGPDDMHNASILLDDSIDGETDKERLSKAKDLIITGFKL
GINEGPLCNEPIRNCKFKILDAVLSGSKIQSSGSQIIPMTRNAVHTGFLTASPRLMEPVY
RVSVTCTYNSIQAVSILLGKRRGWIVDEYPIPATKLYEIEGFVPVIDSVGLDTDMRLQTQ
GQAMCYLDFAKWDTVPGDPLDRDCHLPQMKPVPRQSMARDFVLKTRRRKGLSGEPNLQKY
LDPELYLRLKNSGIIN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgatgacgatttatatgatgagtttggtaacttcataggaaacccagaaaat
tcggatgctgaatctatgaaccaaacgtccaaacaagggaataataaagatgaacattca
gattcttcaatggacgaagacgaagcaccaaaagagctggaggaaacatccatgataaag
aaggaattctcagacactcatacattcgagactattgttgtggatcccacacatcaagga
gatgaacagcctattattaaacccattgctgaccaaaaactatacattgagtatgcgaag
acagttgattcttcggaccttcccgaggttacatactcccgagactatatgaaatccttg
ctaaaagatattcctgagaggattcgtaactttgccatagttggaagcttgcataccgga
aaaactagcttggtggacagattggtgttggaaactcatccgacaatagatgaagggaaa
caaaaccttcaagaatttaaaagcttacggtatttggatagtcacaggttagagaaagaa
agaggaatttcaattggtgcttccttattaactcttttatgtccagacagcagagatagg
tcgcatgttttaaacattattgattgtccgggccatcctgactttctagatgacacttct
gcagcactatcagttgttgagggcgcagttttggtgttggatttgctcgaaggattcact
aagaaagacaagagaattgtcactcatttgattaaaaagaatctaccatttgttgttgtt
ttgaacaaatttgacagattaattttggagctcagacttccgccacgggagttcttccat
aaagtaagatatgtgcttgatgacatcaatctgttcattcatcataatgaatttatcagc
acatacacacatgaaaaactagtcagtccattaaagaacaacgtcgttttttcgtctctg
attcttctgacaaccttttccttaaggtcctttagtaaactttactgtgacaatcaacaa
tttgctaaagatttagaccaaaaacaactcgaaagattgctctggggagagatttctttc
gacgagaataaaaaacaattctttgtgctcaacgaagacgctgttttggactccaaacgt
acatttgagatgtttatcttggatcctctctacaagctcgtcacatatactttaacttcc
gatggaaatggccatagactatcaaaacttctttgggataacttcaaagtcacgcttcaa
aaatccgcatataagaaagacccgcaaatacttttgaaaattgtatttggttcagtgttt
ggaagtacccaagccctagttgatctgattaccactgccctaccggggccagagaaaaat
gcagaatgtcttttgaagcgggggcttgatctcagagacgaatattcgagcgagcttgtg
gctgaggtgttcaaaactcagttgacatccgatacgaaaggatttgtctcatttattcgt
attcatcaaggatctttaaaggaagggcaacgcgtaagaattgttggggataatcatatc
gatgacaggaaggatgatgtgatttgcgaggtcggcgagatatatcttgctggaggaaga
tataaagtgccttacgaagaagcttctgctggctctatagtgattgtgactggtatcaac
gaagcaattcaaaaatgcgcaacagtgcttggacagtcgatccctaagagtctagtaaag
cctattcattgggccgaaagcgaacgaagggctgtttacaaagttgcagtagagcccgaa
aaaccaagcgaattgccaagattggtggatggactaaagcaactaagcagaacttatctt
tctgctgtagtcagattagaggaaagtggggaacatgtgattttggctccaggagaactc
tatatggactgttttcttcatgacctcagatatcttttcgacgactacttctcgatcaaa
gttagtgatccaatggtcaagttcagtgaaacttgtgccgaaaggtccgtcactaaaata
gacacgtatgcatcatcaaaaaagagccagatctccatcacatctgaaccttttaatgat
acaaaggtcagtcaagctatacaagaaggaaagataagtttggcccaaccgagcaaagtg
acttcgaagactttgagaacggagtatggatgggattccctttcagcaaggtcattatgg
tgttttggaccagatgatatgcacaatgcttcgattcttttagatgattccattgacggt
gaaacagataaggaaaggctttcgaaagctaaagatctcattatcactggtttcaaattg
ggtataaacgaaggcccactctgtaatgaacccatcagaaattgcaagttcaagatcttg
gatgctgtgttgagtggatcaaaaatccagtcaagcggttctcaaatcatacctatgact
agaaatgccgtgcatactgggtttttgacggcgagtccaaggctcatggagcccgtatat
cgagtatcagttacatgtacttacaatagcatccaggccgtgctgatattattgggaaag
aggagaggctggatagtcgatgaatatccaattccggccaccaagctctatgaaattgaa
ggattcgttcccgtgattgactccgtgggtctcgacacagatatgcgtcttcaaacccaa
ggccaagccatgtgctaccttgattttgccaaatgggatacagttcccggagatccgttg
gatagagattgccatctcccacaaatgaaaccagttccacgacagtcaatggctagagac
ttcgtgcttaaaacgcgcaggaggaaaggcttgagcggtgagcccaatttgcaaaagtac
ctcgatcccgaactctacttgcggttaaaaaacagcgggataataaattga
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