Columba livia (rock pigeon): 102087467
Help
Entry
102087467 CDS
T02912
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102087467 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clv03041
]
102087467 (EFTUD2)
Spliceosome [BR:
clv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102087467 (EFTUD2)
Complex C
U5 SnRNP specific factors
102087467 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
102087467
NCBI-ProteinID:
XP_005508166
UniProt:
R7VWQ8
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDDLGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagttcgggaactacatcgggcccgagctggactcggac
gatgatgatgacgacttgggaagagagtccaaggacctggacgagctggaggacgatgac
gatgatgatgacatgggggaccacgacgaagaccacccggggatggaggtggtgctgcac
gaggataagaagtactaccccaccgccgaggaggtgtacggacccgaagtagagaccatc
gtacaagaggaagacacacagcccctcactgagccaattattaaacccgtgaaaaccaaa
aagttctctttgatggaacagacgttaccggtcaccgtctacgagatggatttcctggca
gatctgatggacaactcggagctgattcggaacgtgacgctgtgcgggcaccttcaccac
ggcaagacgtgttttgttgactgcctgatagaacagacacacccagaaatccgcaagcgc
tacgaccaggacctttgctacactgatatattgttcacagagcaagagaggggagtgggg
atcaagagcacaccggtgactattgtgctgccggacaccaaaggaaagtcttttctcttc
aacatcatcgacaccccaggtcacgtcaatttttccgatgaggtgacagccggccttcgc
atttcggatggcgtcgtgctcttcatcgatgcggctgagggggtgatgctgaacacggag
aggctgatcaagcacgcggtgcaggagaggctggcggtcactgtctgcatcaacaagata
gaccggctgatcctggagctcaagctgccgcccaccgatgcgtattacaaactgcgacac
atcgtagacgaagttaacggcctgatcagcatgtattccaccgacgagaacctcgttctg
tctccccttctgggcaacgtgtgtttctccagctcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagacatcaattaccaggagtttgcg
aagcggctctggggtgacatctacttcaacccgaagacccgcaagttcaccaaaaaggcc
ccaacgagcagctcccagcgcagcttcgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggacgtggacacgaccctgcccaggacgctggatgaacttggc
atccacctgaccaaagaggaattgaaactgaacattcggcccctcctgcggctcgtctgc
aagaagttctttggggaattcacaggctttgtggacatgtgtgtgcagcacatcccttcc
ccgaaggtgggagccaagacgaaaatcgaacatacatacaccggtggcgtggactctgat
ctaggggaggccatgagcgaatgcgaccctgatgggcctctgatgtgtcacacaacgaaa
atgtacagcaccgacgacggcgttcagttccacgcctttggcagagtgctcagcggtacc
atccacgccgggcagcccgtgaaggtcctcggggaaaactacaccctggaagatgaggag
gattcccagatctgcaccgtcggacgcctctggatctcagttgcaaggtaccacatcgaa
gtcaaccgggttcctgctggcaactgggtgctgattgaaggggtggaccagcccattgtg
aagaccgcgacggtcacggagccgcggggcaatgaggaggctcagatcttccgtcctttg
aagttcaacaccacatccgtcatcaaaatcgctgtagagcccgtcaacccctcggagctc
cccaaaatgttagatggtctccgcaaagtcaacaagagttacccctcacttactaccaag
gtggaagagtctggggagcacgtgatcctggggaccggggagctctacctggactgcgtg
atgcatgatctgcgcaagatgtattcggagattgatatcaaggttgccgatccagtggtg
acattctgcgagacagtggtggaaacgtcctccctgaagtgctttgcggagacacccaac
aagaagaacaagatcacgatgatcgctgagccgctggagaaggggctggcggaggacatt
gaaaatgaagtggtccagataacgtggaacagaaagaagctgggtgaattcttccagacc
aaatacgactgggatttgctggctgcccgttccatctgggcctttgggccggatgccact
ggccccaacatcttggtagatgatacgctgccctcggaggtggacaagtcgctgctgggc
tctgtgaaggacagcattgtgcaggggtttcagtggggaaccagggaagggcctctctgt
gatgaactgatccgcaatgtgaagttcaagatcctggatgctgtgattgctcaggagccc
ttgcaccggggcggcggacagatcatcccaacagcccggagagtggtctactccgcgttc
ctgatggccacccctcgcttgatggagccctactactttgtggaggtgcaggctcctgct
gactgcgtgtctgcggtgtacacggtgctggccaggcggagaggccacgtgacacaggac
gctccgatcccgggctctcctctctacaccatcaaagccttcatcccagccatcgattcg
tttgggtttgagacagacttgaggacccacacacagggacaagctttctcgctctcggtc
ttccaccactggcagattgtgcctggagacccattggacaagagcatcgtcatccggccc
ctggagccccagccagccccacatctggccagagagttcatgatcaagaccaggcgcagg
aagggcctgagcgaggacgtgagcatcagcaagttcttcgatgaccccatgttgctggag
ttggccaagcaagacgtcgtcctcaactaccccatgtga
DBGET
integrated database retrieval system
