Columba livia (rock pigeon): 102088528
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Entry
102088528 CDS
T02912
Symbol
TRAF5
Name
(RefSeq) LOW QUALITY PROTEIN: TNF receptor-associated factor 5
KO
K09849
TNF receptor-associated factor 5
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04217
Necroptosis
clv04621
NOD-like receptor signaling pathway
clv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
102088528 (TRAF5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102088528 (TRAF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102088528 (TRAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102088528 (TRAF5)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
102088528 (TRAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-TRAF_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
Zn_ribbon_ACC
DUF4941
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-RING_2
SMC_ScpA
TRAFD1-XIAF1_ZnF
Sina_ZnF
Mu_Gam-Sipho_Gp157-TOTE
DUF7203
Motif
Other DBs
NCBI-GeneID:
102088528
NCBI-ProteinID:
XP_021136355
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MACDEPAGLSGIFTRQNSASAVSLDFEPDADXXXXXXXXXXXXXXXVLRNPHQTGCGHRF
CQQCILSLRELNAVPTCPVDKETIKMHEVFKDNCCKREVLNLHVFCKNIPDCNSKIILGR
YQEHLQQCLFESVQCTNDGCIDQIPRKDLKEHLSQHCKFREEMCQYCNKSVVLNNIKNHE
KNDCPDYPVPCLQNCSQIILKKEIDKHHAVCPEAEVDCPYKQYGCLVKVKRGKLAEHENG
ALREHMLQILDKNSRLEEQISDLYKSLECKEIKIQQLAEAINKCEKEFRQFTQLFGKNSN
LMVSTQALASHLDKSARLESQVKQLIQMANQQQNKLDLRPLFDTIENIKQKIALMETYDQ
RLVVLEGQSSKHDLQINIHKAQLNKNEERFKLLEGTCYNGKLIWKITDYKMKKKEAVEGR
VLSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHVSLYFVVMRGEFDSLLLWPFKQKVTL
MLLDQSGKKNHIVEVFRADPNSSSFKRPDGEMNIASGCPRFVPHTVLENTKNTYIRDDTL
FLKVVVDLTDLEEL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtgacgaacccgctggtctctcgggcatcttcacgcgccagaactctgccagc
gccgtctctctggactttgagcctgacgccgacnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnntcgtccttcgcaacccccaccagacgggatgcgggcaccgattt
tgccagcagtgcattctttctttgagagagttgaatgcagtacctacctgtcctgttgac
aaagaaacaataaaaatgcacgaggtattcaaagacaactgctgtaaaagagaagttctc
aacttgcatgtgttctgcaaaaacatccctgactgcaattcgaaaataattctggggcga
tatcaggagcatcttcagcagtgtttgtttgaaagcgtgcaatgcactaatgatggatgt
atcgatcaaattcctcggaaagacttgaaagaacatttgagccagcactgtaaatttcga
gaagaaatgtgtcagtactgtaataaatctgtggtgttaaataacataaagaatcatgag
aaaaatgactgtcctgattatcctgtgccttgtcttcagaactgttcacaaataattctg
aaaaaggagattgacaagcaccacgctgtgtgtcctgaggcagaagtggactgcccgtat
aagcagtatggctgtcttgtgaaggttaaaagaggaaaacttgctgaacatgaaaacggc
gccctgagggaacacatgctgcagattttagacaagaactcccggttggaagaacagata
tctgacctgtataagagcctggaatgtaaagagattaaaattcagcagctagcggaggcc
attaataagtgtgagaaagaattcagacagtttacacaactgtttggtaaaaatagcaac
ttaatggtcagcacacaggctctggccagccacctggataagtctgcgcgcctggaatcg
caggtgaaacagctcatacagatggcaaaccagcagcaaaataaattagacttgcgaccc
ctgtttgacacaattgaaaacataaaacagaagattgccctgatggagacatatgaccag
cgcttggttgttttggaaggtcagtccagcaaacacgacctccagatcaatattcacaaa
gcacagctcaataaaaatgaagaacgatttaagcttttggaaggcacatgctacaatggg
aaattaatctggaaaatcacagactacaagatgaagaaaaaagaagcggtggaaggccgt
gtcctctccatattcagccagcccttttacaccagccgctgtgggtacaggttgtgtgcg
agagcctacctgaacggggatggttcaggaaagggaacacacgtctctctctacttcgta
gtgatgagaggggagtttgactcgctgctactctggcctttcaagcaaaaagttacgctt
atgcttttggaccaaagtgggaaaaaaaatcacatcgtggaagtgtttagagctgacccc
aatagcagcagtttcaaaaggccagatggagaaatgaatattgcctctggatgtccacgc
ttcgtgccacatactgtcctggaaaacacaaagaacacctacattagagatgacactctg
tttttgaaagtggttgtggatttaaccgatttggaggaattgtga
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integrated database retrieval system
