Columba livia (rock pigeon): 102089693
Help
Entry
102089693 CDS
T02912
Symbol
IARS
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102089693 (IARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clv01007
]
102089693 (IARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clv03016
]
102089693 (IARS)
Enzymes [BR:
clv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
102089693 (IARS)
Amino acid related enzymes [BR:
clv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102089693 (IARS)
Transfer RNA biogenesis [BR:
clv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
102089693 (IARS)
Prokaryotic type
Other AARSs
102089693 (IARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
Plectin_PPL
tRNA-synt_1e
Rpn9_C
Motif
Other DBs
NCBI-GeneID:
102089693
NCBI-ProteinID:
XP_005508940
UniProt:
A0A2I0LW69
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MVQQVPENITFPNEEEKILELWKNLNCFQECLKQSKSRPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIKEYNNQC
RGIVMRYSKEWQSSVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVVVSFPLDEDESVSLVAWTTTPWTLPSNLALCVNP
ELQYIKLRDNATGKIYILMESRLIALYKSDSEYEVLDRFPGGVLKGKKYKPLFEYFIQCK
DKGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTA
EVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSMGELEELSGVKVTDLHRESIDHLTIPSRCGKGLLHRVPEVFDCWFESGSMPYAQVHY
PFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMSIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVQILQHKDEGREFLFNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHQDPEALENVRSLEKYILEELNVRQVTLSTNKDKYGVQLRAEPDHM
VLGKRLKGAFKLVMAAIKELKSEQLEEFQETGTIVVEGHELHTEDLRLMYTFDQVAGGSA
QYEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRAQPEG
DYLDTVIKEHTDFIFATIKAPLKPYPVPPSKDVLIQETTQLKGSELEITLVRGGLCERVG
PACAYVNLKVCVNGTEQDGVLLLENPKGDNTLNLTGLVDAVSCIFGLKNSKLTVFNGKTE
LINKTDLLSLSGKTLHVTTGSAPALLSSPDALLCQYINLQLMNAKPQECQKGTVGTLLME
NPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTEEITKDISMKNLNMKTVYVRVIP
TTAEC
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcaagttccagaaaacataacttttccaaatgaggaagagaagatactggag
ctctggaaaaatctcaattgtttccaggagtgcctaaagcaatcaaagagtagacctagg
tttaacttctatgatggccctccatttgctactgggcttccacactatggccatattctt
gcaggaaccattaaagacatagtaaccagatttgctcatcagagtggttttcatgttgac
agaagatttggctgggattgccatggtttacctgtggaatatgagattgacaaaacttta
ggcattaaagggccagaggacgtggcgaagatgggaattaaagaatacaacaaccaatgc
agaggaattgtgatgagatactcgaaggaatggcagtctagtgttaccagattaggacgc
tggattgattttgaaaatgactataaaactctttatcctgagttcatggagtctgtgtgg
tgggttttcaagcaactgtatgacaaaggactggtgtatagaggtgtgaaggtcatgcct
ttttcaactgcgtgcaacaccccactgtccaactttgagtcccatcagaactacaaggac
gttcaagatccttcagtggttgtgagcttcccactggatgaagatgaaagtgtttctctt
gttgcttggaccactactccttggaccttgcctagtaatttggccctttgcgtcaatcca
gaattgcaatatataaaattgagagataatgccacaggaaagatttacattttgatggaa
tccaggctgatcgcactgtacaaatctgacagtgaatatgaggtacttgacaggtttcct
ggtggtgttcttaaaggcaagaagtataaaccactctttgaatattttattcagtgtaaa
gataaaggtgcctttactgtggtagtggacaattacgtgaaggaggaggaaggcacaggt
gttgtacatcaggccccctattttggtgctgatgattacagagtctgcatggattttaat
attattcagaaagattctgtgcctgtttgtcctgttgacgcatcaggctgcttcacagca
gaagtgactgactttgctggacagtatgtgaaggatgcagacaagaacatcattaaatta
ctgaaagaaaaaggcagactggttcacagcagtagtttcaaacacagctatcctttctgc
tggaggtcagatactcccttgatatacaaagctgtgccaagctggtttgtaagagtggag
cacatggtggagaagctactggagaataacgcccagtgctactgggttccagatttcgtg
agggagaagcgttttgggaactggcttaaagacgcacgagattgggcgatatctagaaac
cggtactggggaacacccatccctttgtgggtcagcgacgattttgaagaggtagtttgt
attggttcaatgggggaattggaagagctgtctggagtgaaagtcactgatctccatcga
gaaagtattgatcacctaaccatcccctcacgctgtggaaagggtttactgcaccgcgtt
cccgaagtctttgattgctggttcgagagcggcagcatgccttatgcacaagtccattat
ccatttgaaaacaaaaaagagcttgaagatgctttccccgctgacttcattgctgaaggc
attgaccaaaccagaggatggttctacactttgctggtgctgtccacagctctttttgga
aggcctcctttcaagaacgtaattgtgaatggccttgttcttgccagtgatggccaaaaa
atgagcaagaggaagaagaattatcctgatccaatgagtatcgtgaatagttatggagct
gatgcactaaggttatacctgatcaattctcctgtggtaagagctgaaaatctgagattt
aaggaagaaggagtaagggatatactgaaggatgtcttcctgccctggtacaatgcgtat
cgcttccttgttcagaatgttcagatcctgcagcataaggatgagggaagagaattcctt
ttcaatgagaacacagttaaggagagcaataacatcatggataagtggattctttctttc
acccaatcactcattcagttcttcaaagctgaaatggcagcttacaggctgtacactgtg
gtccctcgattagtgaagtttgttgatattctgaccaactggtatgttagaatgaaccgc
agaagactaaagggcgagaacgggactgaagactgcattatggccttggaaaccttgttt
agtgttttgttctccatgtgcagacttatggcaccatatactccgtttatcactgaactg
atgtaccagaatctgaaaacacttattgatccggcctcggttcaggaaaagaatacagaa
agcatccactacctcatgcttccccaagtgagggaggatctcatcgacaaaaaaattgaa
agtgccgtttcttgtttgcagtctgttattgagcttggacgggtaatcagagacagaaaa
accattccagtaaagtatcctttgaaagaagtagttgttatccatcaggatcccgaggct
ctggaaaatgtcaggtctttagagaagtacatacttgaggagctcaatgtacgtcaagtg
acattatctactaataaagataaatacggagtccagctgagagcagaaccggatcacatg
gtgcttgggaagcgcttgaaaggtgcatttaagcttgtcatggccgccatcaaagagctg
aagagcgagcagctggaggaattccaggagacaggcaccattgttgtagaaggacatgag
ctccacacggaagatctgcgtctcatgtacacctttgatcaggttgccggaggatctgca
cagtatgaagcacattccgatgctcaggttttagttctgctggatgttaccccagaccag
tccatggtggatgaaggagttgcccgggaagtgattaatcgcatccagaagcttcgcaaa
aagcgaaatctggttcctacagatgagattacagtgtactacagagcacagccagaaggt
gactacctggacactgttattaaggaacatacagatttcatttttgcaacaataaaggct
cccctgaagccttacccagtgcctccctccaaagatgttctcatccaggagacgacccag
ctgaagggatcagagctagaaattacactcgtccgaggtggtttgtgtgagcgtgttggt
ccagcctgtgcctacgtcaacctcaaagtttgtgttaatgggacagagcaagatggtgta
ttgctgctggaaaatccaaaaggagataatactttgaacttgactggacttgtagatgct
gtctcctgcatttttggtcttaaaaattcaaaactgacagtttttaatggaaaaacagaa
ctgataaacaaaactgacttgcttagtctcagcggaaagactctgcatgtgacaacaggg
tcagcacctgctctgctcagctcccctgatgctctgctctgccagtatatcaacttgcag
ctgatgaatgcaaaaccacaagaatgtcagaagggaacggtggggactcttctaatggaa
aaccctgttggccagaatggattaacgtaccagggtcttctacatgaaacggcaaaagtt
tttgggctcagaagcaggaggctaaaactgttcctggatgaagcacaaactgaggagatc
acaaaggacatctccatgaagaacttgaacatgaagactgtgtatgttcgtgtcataccc
accacagctgaatgttga
DBGET
integrated database retrieval system
