Columba livia (rock pigeon): 102091799
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Entry
102091799 CDS
T02912
Symbol
PCDHGC3
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C3
KO
K16497
protocadherin gamma subfamily C
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clv04515
]
102091799 (PCDHGC3)
Cell adhesion molecules [BR:
clv04515
]
Cadherins
Protocadherins
102091799 (PCDHGC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
102091799
NCBI-ProteinID:
XP_021144593
LinkDB
All DBs
Position
Unknown
AA seq
1752 aa
AA seq
DB search
MASGRVLLPALLLGLCWRAAAERLRYAIPEELGRGSLVGPLARDLGLSPADLPARKLRLS
AEKQYFTVSGENGNLYVSERLDREEMCGEAVSCSVSFEALVQNPLNVFDVEVAIQDINDN
SPRFLKENMQFEIIESTIPGARFYLGMAEDADVGSNSLQGYELEANGYFAVEVKESPDGS
KFAELVLRRALDREREASLRLVLTALDGGDPPRSGTAQLCINVTDANDNTPVFAQDRYRA
SLREDAPPGSTVLNVSASDADAGTNARITYSFGETPAKVLQKFAVDPEGGMITLQEALDF
EDTRSFSLAVEARDGGGLVAHCKVEVDVLDVNDNAPEVTLTSVSSPVPEDAPAGTVVALL
KMRDRDSGENGEVSCELSGEAPLSLVKSSGGSYKVVTASALDREQAAEHRVTVVARDRGR
PSLSSSTALVLEVSDVNDNAPVFEEAAYSAYVAENNAAGAPILRVLALDPDAGANGRVSY
WLSGGSADAAAYVSVEARSGALYAQRSFDYEQCREFAVVVRAQDGGEPARSSTATVRVFV
LDRNDNAPRVLWPAPEAGERVPGSAPALEPFEVVPRSAEAGYLVAKVDAGQNAWLSYELV
QAAEPALFRVGLHSGEVRTARAVSERDAAKQRLVVVVKDHGQPALSATATLHVVLAESLQ
EALPELSERAAGADSAAELQFYLVLALALLSGDNDTASELTSDLNLILVVALAVVSLVFV
LTVILIFFKCRRSRSPPIFITSDKELYSSLGSKVPYNYCSSTLPLPYSYEVCLASDSGQK
DFTFLRPGTTALSDCLLDGEHGSGTHSRKDPPIPESLAQPGRGGAKRGARPSCAMNGVAV
RSRGVTTGQVLSLLLLFGVSDWVSAAIRYAIPEEARRGSAVGNVVADLALDLGRLPGRRL
RVVSGGNKKYFGVDLTSGALLVSERIDREELCGALSPCSLSFEIVVENPLELFSGAVEIQ
DINDNDPVFPSSQARLEISESVAAGARFPLESAQDPDVGINSLQTYQLSANPHFALDVQT
RVDGSKYAELVLEKELDREEQRELHLVLTALDGGSPPRSAHVQIHIEVVDANDNAPVFNQ
STYKASVRENTPSGTLVARISAYDLDDGPNGDIVYSFSSHTPAKVRELFALDSATGELRV
KGQLDYEETKLYEIYLQAKDKGAVPGVAHCKVLVEVVDVNDNSPEVTVTSVYSPVPEDAA
PGTVVALLSVTDLDSHDNGVVNCFISPGIPFMLSSSLKNYYTLKTKAALDREKASEYNIT
ITARDSGSPPLSAVKQILVQVSDVNDNAPKTSQDSYDVYVLENNVPGIPILNISATDPDL
GRNAHLSYSLLQAGHIFSINRENGTLYLLTSLDHEDQVEFSMMVQVQDGGSPPLATNVSV
SVFVTDLNDNAPTVLYPQPNTTATYTDVVAPGTPAGHMVTKVVAVDADAGYNAWISYTLL
QATDPSLFSVGLHSGEIFTARQLQEDDVPQXVLSTSATVSISVAELAKEVLTDLTDMAPT
NDPRKHVTFYLILAVILVSAAFFITMLSVGIFKCYKWRQSKELFNSSRSTLYRTPGPFHH
IDAVRGGFTPPNFYHQVYLTTDSRQSDLCKKPFTSSPLGSRQSTMRNGEPGLYHQIVGTT
TRLPIPAEQAQPNTDWRFSQTQRPGTSGSQNGEEGGAWPNNQFDTEMLQAMILASANEAA
DANSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPGSTATLTNAAGKRDAKSAASSG
GNKKKSGKKEKK
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgggcgagtgctgctgcctgctttgctgctgggattgtgctggcgggcggcg
gcggagcggctccgctatgccattcccgaggagctgggcagagggtcgctggtggggccg
ctggcgcgggacctggggctgagcccggcggacctaccggcacgcaagctgcggctcagc
gccgagaagcaatacttcacggtgagcggggagaacgggaacctgtacgtgagcgagagg
ctggaccgggaggagatgtgcggcgaggcggtgtcctgctccgtcagcttcgaggcactg
gtgcagaacccactcaatgttttcgacgtcgaggtggccatccaggacatcaacgacaac
tccccgcgttttcttaaggagaacatgcaattcgaaatcatcgaatctaccattcccggc
gctcgtttttacctgggcatggcagaagacgcggacgtgggcagcaactcgctgcagggc
tacgagctggaggccaacgggtacttcgcggtggaggtgaaggagagtccggacggcagc
aagttcgcggagctggtgctgcgccgcgcgctggaccgggagcgcgaggcgagcctgcgt
ctggtgctgacggcgctggacggcggcgacccgccccggagcggcaccgcccagctctgc
atcaacgtcacggacgccaacgacaacacgcccgtgttcgcgcaggaccggtaccgggcg
agcctgcgggaggacgcgccgccggggtcgacggtattgaacgtctccgcctctgacgcg
gacgccgggaccaacgctcgcatcacgtatagcttcggggaaacgccggccaaggtgctt
cagaagtttgcggtggaccctgagggcgggatgatcacgctgcaggaggcgctggacttc
gaggatacacggtcgttcagcctggccgtggaggcgagggacgggggcggtctagtggcg
cactgcaaagtggaggtggatgtactggatgtcaacgacaatgcgcccgaggtgacactg
acgtcggtatcgagcccggtgcccgaggacgcgccggccggtacggtggtggccctgctg
aaaatgagagaccgggattccggggagaacggggaggtgtcgtgcgagctgtcgggcgag
gcgccgctgtcgctcgtgaagtcgtcgggtggctcgtacaaggtggtgacggcgagtgcg
ctggaccgggagcaggcggccgagcaccgcgtaacggtggtggccagggaccggggccgg
ccgtcgctgtcgagcagcacggcgctggtgctggaggtgtcagacgtgaacgacaacgcg
ccggtgttcgaggaggccgcctacagcgcctacgtggcggagaacaacgcggcgggcgcg
ccgatactgcgcgtgctcgcgctggaccctgacgcgggcgccaacggtcgcgtgagctac
tggctgtcgggcggcagcgcggacgcggcggcgtacgtgtcggtggaggcgcggagcggc
gcgctgtacgcgcagcgctccttcgactacgagcagtgccgcgagttcgccgtggtcgtg
cgggcgcaggacggcggggagccggcgcggagctcgacggcgacggtgcgcgtcttcgtg
ctggaccgcaacgacaacgcgccgcgggtgctctggccggcgccggaagcgggagagaga
gtgccggggtcggcgccggcgttggagccgttcgaggtggtgccgcgttcggccgaggcc
gggtacctggtggccaaggtggacgcggggcagaacgcgtggctgtcgtacgagctggtg
caggcggcggagccggcgctgttccgcgtggggctgcacagcggcgaggtgcgcacggcg
cgggccgtgtcggagagggacgcggccaagcagcggctggtggtggtggtgaaggaccac
gggcagccggcgctgtcggccacggccacgctgcacgtggtgctggccgagagcttgcag
gaggcgctgccggagctgagcgagcgggcggcgggcgccgactcggcggcggagctgcag
ttctacctggtgctggcgctggcgctgctgtccggtgacaacgacactgcgtctgagctg
acgtctgatttaaacctcattcttgtagtggcccttgctgttgtgtcgttggtatttgtt
ttaacagtcattttgatattctttaaatgccgacggtcaaggagccctcccatttttata
acttctgataaggaattgtattccagcttgggctcaaaagtaccgtacaattactgcagc
agcacgctgcccttgccctattcctacgaggtgtgtttagcgtctgactcggggcagaag
gacttcacatttttgagaccagggacgacagcgctgtctgactgtctcctggacggggaa
cacggctcaggtactcactccaggaaggaccctcccatcccagagagcttggcacagccg
gggcggggaggggcgaagcggggagcgcggccgtcctgtgcgatgaacggcgttgctgta
aggagccgcggggtgacgacggggcaggtactgagcctcttgcttttgttcggcgtttcc
gactgggtttccgccgctattcgctatgcgattcccgaggaggcgcggagaggctccgcg
gtggggaacgttgtagccgacctggcgctggacctcgggcggctgccgggacgccggttg
cgggtggtgtccggcggcaacaaaaagtacttcggggtggatctgacgagcggcgcgctg
ctggtgagcgaacggatagaccgggaggagctctgcggtgcgctctctccctgctctctc
agctttgagatcgtggtggaaaacccgctagagctgttcagcggcgccgtggagatccag
gacatcaatgacaacgacccggtttttcctagcagccaggcgaggctggaaatcagtgag
tcggtggcggccggagcgcgcttcccgctagagagcgcccaagatcccgatgtgggaatt
aactctttgcagacctaccagctgagcgccaacccgcactttgcgctcgacgtgcagacg
agggtggatggcagcaagtatgcggagttggtgctagagaaggagctggacagggaggag
caacgggagttgcacttggtcttgaccgcgctggatggaggcagcccaccacggtcggcc
cacgtgcagatccacattgaagttgtggatgccaatgataatgccccggtcttcaaccag
tccacctacaaagcgagtgtgagggagaacacacccagtggtaccctagttgccaggatc
agtgcatatgatctggatgatgggcccaatggagatatcgtctattccttcagcagccac
actcccgccaaggtacgagagctctttgctctggactcagccacgggggagttgagggtc
aaggggcagctggactatgaagaaacaaagctgtacgagatttacttacaggctaaagac
aagggtgctgttcctggtgtggctcattgcaaagtgctggtggaagttgtggatgtgaat
gacaacagtccagaggtgacagtgacttctgtgtacagccctgtgcctgaagatgcagcc
ccaggaacagttgtagctctgctgagtgtaacagacttggactcccatgataatggtgtg
gtgaactgcttcatttctcctgggatcccattcatgctcagctcctccctcaaaaattac
tacacattgaaaacaaaagcagccttagaccgggaaaaggcatcagagtataacatcact
atcacagccagggactcaggctcaccaccgttgtctgcagtaaaacagatcctggtgcag
gtgtcagatgtcaatgacaatgcgcccaagacttcccaggactcctatgatgtctatgtg
ctggagaacaacgtgcctgggatccccattcttaacatcagtgccacagacccggacctt
gggcgcaatgcccatctttcctatagcctcttgcaggctggccacatcttctccattaac
cgggagaatggcaccctctacctgctcacctccctggaccatgaggaccaggtggagttc
agcatgatggtgcaggtccaggatggcggctctccgcctctggccactaatgtctcagtc
agtgtgtttgtcactgacctcaatgacaatgccccaactgtgctgtaccctcaacccaac
accactgccacctataccgatgtggtggcaccaggcactcctgccgggcacatggtcacc
aaggtggtggcggtggacgcggatgcagggtacaatgcctggatctcctataccctgttg
caggccactgaccccagcctcttctcagttgggctgcacagtggggagatcttcacagcc
cgccagctccaggaggatgatgttccccagnctgtgctgtccaccagtgccactgtctcc
atctctgtggctgagctggccaaggaggtgctcactgacctcactgacatggcacccacc
aacgatccaaggaagcatgtgaccttctatctcatcctggctgtgattttggtgtctgca
gcttttttcatcaccatgttgtcagttggcatcttcaagtgctacaagtggaggcagtcg
aaggagctgttcaacagctccaggagcacgttgtacaggacaccagggcccttccaccac
attgatgccgtgcggggtggcttcacgccacccaacttctaccaccaggtctatctcact
acggattctcgccagagtgatctgtgtaaaaagcccttcacttccagccccctggggagc
cgccagagcaccatgaggaatggtgagccagggctgtaccaccagatcgtgggcaccacc
acccggctccccatacctgccgagcaagctcagcctaacacagactggcgcttctctcag
acccagagacctggaacgagtggctcccagaatggagaggaaggtggagcctggccgaac
aaccagtttgacacggagatgctccaagccatgatcctggcctcagcaaacgaagctgct
gatgccaactcgaccctgggcggtgggacaggcaccatggggctgagcgcccgctacggc
ccccagttcaccctgcagcacgtccctgattacaggcagaatgtctacatcccaggcagc
accgccaccctcaccaacgccgctggcaagcgcgacgccaagagcgccgcctcctcggga
ggcaacaagaagaaatctgggaagaaggagaaaaagtag
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integrated database retrieval system
