Columba livia (rock pigeon): 102092158
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Entry
102092158 CDS
T02912
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04514
Cell adhesion molecules
clv04520
Adherens junction
clv04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clv01009
]
102092158 (PTPRF)
Enzymes [BR:
clv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
102092158 (PTPRF)
Protein phosphatases and associated proteins [BR:
clv01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
102092158 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
V-set
DSPc
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
102092158
NCBI-ProteinID:
XP_021141350
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MVPNFCVPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIVQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKP
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPAS
QERITKYELLYWEGEDGAQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTI
EARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKH
VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPQGQPVIKDVMLSEAQWRAEDS
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVSWDPPVLAERNGKIVNYTVVYRD
INSQQDLVNITKDTSITLTNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYMQEGKFTLALPKVQTTVPVRWYYIVVV
PADQSTSSPTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLAHSSDPVEM
RRLNYQTPGASVPSCPNISSMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQF
TWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQG
PLPETLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLVDTVEL
ATYTLRTFALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPLV
VHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALL
EAATCGNTEVLARNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNK
FKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWR
MLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGR
TGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEXQYQLCYRAALEYLGSFDHY
AT
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcgtcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcagacagcaagccaacgtttatgaaagctcctgaagatcag
attgggatttctggaggagtggcatcctttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacatggatgaagaaggggaagaaagtcagttctcagcggtttgaggttattgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgcgttcatcgagatgaa
gcgatctatgagtgcacagcaaccaatagtgttggggagataaacacaagtgccaaatta
acagtgctagaagaagaccacctcccggccggcttcccgaccattgacatgggcccacag
ctgaaggtggtggaaaaggcccgcacggccaccatgctctgtgctgccagcggtaacccc
gatcccgaaatctcctggttcaaggacttcctgcccgtggacaccgcaaccagcaacggg
cgcatcaagcagctccgctcgggtggtacaccgatcagaggagctctgcaaatagagaac
agcgaggagtcagaccaaggcaaatacgagtgtgtcgccaccaacagcgcaggaacccgc
tactctgccccagccaacctttatgttcgagtgcggcgtgttgctcctcgattctctatc
cctccgagcaaccacgaggtgatgcctggggggagcgtgaacctcacgtgcgtggcagtg
ggtgccccgatgccctacgtgaagtggatggccggcgtggaggaactgaccaaagaggat
gagatgcctgtcggtaggaatgtcctggagctaaataacatcgtccagtctgccaactac
acctgtgtggccatctcctcgctcggcatgatcgaagccacagcccagatcactgtcaaa
gcactgccaaaacctccaacagagccattagtgactgaaacgacagctaccagcgtgacc
ctcacctgggactcaggcaactccgaccccatttcatattacgtcatccagtacaagccc
aaatccttggagggtcagttccaggaggtggatggtgtggcaacaacccgctatagcata
ggtgggctcagccccttctcagagtatgagttccgggtcatcgcagtcaataacattggc
aggggcccccccagtgagctggtcgaggcccggacaggagaacaagctccttcaagtcca
cccctcaaagtccaggcgcggatgctgagcgccagcaccatgctggtccagtgggagcag
ccagaggagccgaatggacagatcagagggtaccgcgtttactataccaccgacccgcat
ctgcccttgagcatgtggcagaaacacaacaccgacgacagccacctcaccaccgtgggg
agcctcatcactgggaccacgtacagcatccgcgtcctggcctttacttcagtgggtgac
gggcctccctcggacatcatccaggtcaaaacgcagcaaggggttcctgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatcctgctgacgtggctgcccgcctct
caggagcgcattaccaaatacgagctgctgtactgggaaggggaggatggcgcacagcaa
aaggtggagtttgacccaacctcctcatatgctgtggaaggtctcaaaccagacacgctg
tataagttccgtctgggtgcccgctcagagctgggcgtaggagtctacacccccacgatc
gaagccagaactgcccaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccactaccatccgggtaagttgggtgccaccgcctgcccagagccgcaatggg
gtcatcacccagtactccattgcgtaccaggcagtggaaggagatgacaacaccaagcat
gtggtggatggcattggacgggagcactccagctgggagatcaaggacctggagaaatgg
accgagtacaaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcatc
cccgtgcacgtgcgcactgacgaggatgtgcccagtgccccaccgcgaaaggtggaggta
gagtctgtgaattcgactgccatccgggtgagctggaagctgcccatctccaacaagcag
catgggcagatccgcgggtaccaggttacatacgtgaagctggaaaacaacgagccccaa
gggcagccagtgatcaaggacgtcatgctgtcagaagcacagtggagagctgaggactcc
gtcgaccacgagacggtcattggaggcctgctgccagaaaccacctactccgtcaccgtc
gctgcctacaccaccaaaggagatggtgcccgcagcaagcccaaagtcatcaccaccaca
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctacagtac
agacgtcttgacgaggagaagatgaacacaatagacttcgggaagagagaccatcactac
accgtgaccaacctgcacaagggggccacgtacctcttcaaattgtctgccaagaacaga
gctggcccaggagaggagtttgagaaggagatcactactgcagaagatgtgccaagcggc
ttcccacaaaacctgcgcgtggtgggtctcaccacttctaccacggaggtttcctgggac
cccccagtcttggcagaaagaaacggcaagattgtcaactacacagtggtatacagggac
ataaatagccagcaggacctggttaacatcaccaaggacacaagtatcactttgacgaat
ttgaagcccgataccacttacgacatcaaagtgagggcccgcaccaataagggggttggg
cctctcagccccagcatccagtcccggaccatgcctgttgagcaagtgtttgctaagaac
ttccgcgtcaatgccgtcatgaaaacgtctgtgttgctgagctgggaagtgcctgactcc
tataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggacggc
cactcgatgaagaaactcataagtgacctccagccagacacggactattcttttgtgcta
atgaaccgcgggagcagtgctggggggctgcagcacctcgtctcgatccgcaccgctcct
gatgtcttgcaaagcaaacccatcgccacaaacaagtacatgcaggaaggaaaattcaca
ctcgcccttcccaaagtccagaccactgtgccagttaggtggtactacatcgtggttgtg
ccagcggaccagagcaccagcagcccgactgctcggtggcggacacctgatgagatggag
ctggaccagctgctggaggccataagccaagggagtcagagcaggcgccagagacgccag
gcagacaggctcaagccctacatcgctgctcaagtggatgtgctgcctgagaccttcacc
ttgggtgacgagaagaactacaaaggtttctacaacaagcccctgtctcaagacctgagc
tatcgctgcttcgtgctggcttctctggaggatggagacacgaagagatatgcagccagc
ccctactcggatgagatcgtgatggaagtggcttcagcgaagcagcaggatgaaccggag
atgctgtgggtgatgggacccgtcctggctgtgatattaatcattatcattgtcatcgct
atactcctcttcaaaagtaaacaagaaaggaaaagggcccactccccctcttccaaggat
gagcactccatcggcttgaaggactcgctcttggcccactcctctgacccagttgagatg
agacggctcaactaccagactccaggtgccagtgtccccagttgcccgaatatctcaagc
atgcgcgaccacccccccatccccgtgacggacctcgccgacaacatcgacaggctgaaa
gccaacgacgggctgaagttctctcaggagtacgagtccattgatccggggcagcagttc
acctgggagaactccaacctggaagtgaataaacccaaaaaccgctatgcaaacgtgatc
gcctacgaccactcacgtgtcatcctgacctccatcgatggggttccaggcagtgattac
atcaatgccaattacatagatgggtatcggaagcagaacgcctacatcgccacacaggga
cctctgccagaaaccctcagtgacttctggaggatggtgtgggaacagagaacagcaact
atagtcatgatgaccaggctggaggagaagtccagggtgaagtgtgaccagtactggcca
agccggggtacggaaacctacgggatgatccaggtgaccctggtggacacagttgagttg
gcgacctataccctccgcacctttgcattgtacaagaacggctccagtgagaagcgagag
ctgcgacagttccagttcatggcttggcccgatcacggggtacctgaataccccaccccg
atcctggctttcctgcggcgggtcaaggcctgtaacccgccagacgctgggcccttggtt
gtccattgcagtgctggtgtgggccggactggttgcttcattgtcatcgatgccatgctg
gagcggatgaagcatgagaagaccgtggacatctatggccacgtgacgtgcatgcgctcc
cagcgcaactacatggtgcagacggaggaccagtacatcttcatccacgaggccttgctg
gaggcagccacgtgtggcaataccgaggtgcttgcacgcaacctctttgctcacatccag
aagctgacccaggtgccaccaggcgagagcgttactgcaatggagctggaattcaagctg
ctggccaactctaaagcacatacctcacgtttcatcagtgccaacctcccatgcaacaaa
ttcaagaaccgccttgtgaacatcatgccatatgagctgacgagagtctgtctgcagccc
atccggggtgtcgagggctccgattacatcaatgccagcttcatagatgggtacaggcag
cagaaggcctacatcgccacgcagggaccgctggccgagaccacagaggatttctggcgg
atgctctgggagcacaattccaccatcgtagtgatgttgacaaagctgcgcgagatgggc
cgggagaagtgccaccagtactggcctgcagagcgctctgcccggtaccagtacttcgtg
gtggaccccatggcagagtacaacatgccgcagtacatcctccgggagttcaaggtgacg
gatgccagggatggccagtcacggaccatccgccagttccagttcacagactggcctgag
cagggagtgccaaagacgggtgagggcttcatcgacttcattgggcaggtgcacaagacc
aaggagcagttcgggcaggatgggcccatcacggtgcactgcagcgctggggtcgggcgc
acgggcgtgttcatcacgctcagcatcgtgctggagaggatgcgctacgagggggtggtg
gacatgttccagacggtgaagaccttgcggacgcagcggccggccatggtgcagacagag
gnccagtaccagctgtgctacagggcggcactggagtatctcggcagcttcgaccactat
gcaacgtaa
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integrated database retrieval system
