Columba livia (rock pigeon): 102093430
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Entry
102093430 CDS
T02912
Symbol
SMG6
Name
(RefSeq) LOW QUALITY PROTEIN: telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102093430 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102093430 (SMG6)
03032 DNA replication proteins [BR:
clv03032
]
102093430 (SMG6)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102093430 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
102093430 (SMG6)
DNA replication proteins [BR:
clv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
102093430 (SMG6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
102093430
NCBI-ProteinID:
XP_021142747
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MEDFGKGDGPKQNGPSQENEETETKGGLQSPENSSKQPAADEWCPKTTRRTKKPDQQIYQ
PGKRLHSAAKELSLWSAAEEVTGKMEQLKIERDEETEKGTRKDNNRKTKSSKEDREGSQA
REGVRTSRGEKGRRTERSDRMRRTSDEVTQGKLGSTKRYSRSDKRRSRYRTCSTSSAGSN
NSLDGASLVDGMERRQERARERIRPRKQLSASSTDSLDDDRTNEAXXXXXXXXDKKKRSE
QSRASRSENEWNSNGREVKGPFRVTFDSKTMNRDVSLADTDKKKPLKAFVGGNDSETCEE
RSQSREPQGRGRGILFLPANTDLSASTAGSPEPGHPGPRLLLGGAGSKGPRSRGRGGTAR
RLWDPNNPDQKPALKSQTAQLHFLDTDDEVSPTSWGEARQAQASYYKFQNSDNPYYYPRA
AGQGPQYPXXXXXXXGPSNGVYPGAYFPGYPGQAGQYLCGPLPPAPLSPEMEQQMRNMQQ
QELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRVEMLQLYERCILMDIEFSDTQN
VDQLLWKNAFYQVIEKFRQLLKDPQGENAQEIRNKLLQLLDEGTSFFDGLLQKLQVSYQF
KLEDYMDGMVIRTKPLRKMVKYALISAQRCMICQGDICRYREQANDTANYGKARSWYLKA
QQIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAE
QMEQRKHQVLDLSPSRWGKGKKPTLRQVGDDATRLEIWIHPSHPRSSQGHESGRDSEQDN
GLGNLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEEVLREFQVLLQHSPPPIGSTR
MLQLVAINMFAVYNSQPKECISEDCRSVIQEQATALGLSMFALLVRRCTSLLRECAQVQP
QEVEQEDEEDDIKVSALPQDLKELLPSVKVWSDWMLGHPDTWNPPPTSLELPKQVSVDVW
ATLADFCNILTTVNQSEVPLYKDPDDDLALLSLEEDRLLSGFVPLLVAPQEPCYVERTSD
KVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDAMGKEMGSQEGKQLEDQ
EDDVRIEAYEDDSEAEGSGGEMDIKELRAKKQALARKVAEQQRRQDKIQAVLKDQSQMRQ
MELEIRPVFLVPDTNGFIDHLSGLRTLLDCRKFILVVPLIVINELDGLAKGPEMEHRAAG
YARQVQERARKSIEFLEERFESRDNCLRALTSRGNELESISFRSEDTTGQQGNNDDLILS
CCLHYCNDKAKDFMPTNKDDPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPTFLKWAQE
G
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttcggcaaaggtgatggccccaagcagaatggtccttcgcaggaaaatgaa
gagacagagactaaaggcggtcttcagagcccagagaactcctccaagcagcctgctgcg
gatgagtggtgtcccaagaccaccaggagaaccaagaagccggaccagcagatctaccag
cctggaaaacgcttgcactcagctgctaaagaactgtccctgtggtcagcagctgaggag
gtcactggtaaaatggagcagctgaaaattgagagagatgaggagactgagaaaggtacc
agaaaagacaacaacaggaaaaccaaatcaagtaaggaggatagagagggcagccaggcc
agggaaggagtcagaacctccaggggagaaaagggaagacgaacagagcgaagcgacagg
atgaggagaaccagcgatgaggtgacacaggggaaactaggctccaccaaacgctactcc
cgctccgacaagcgccggagccggtaccgcacctgcagcacaagctcagctggaagcaac
aacagtttagatggagcctcgctcgtggatgggatggagaggcgacaggagcgcgccagg
gaaagaatccgtcctaggaagcagctctctgcatcctccactgactccttggatgatgac
agaaccaatgaggctgnnnnnnnnnnnnnnnnnnnnnnngacaagaagaagcgttcagag
cagagtcgagcttctaggagcgagaacgagtggaacagcaacggcagggaagtcaaggga
ccctttcgagtcacgtttgacagcaagactatgaacagggatgtcagcttggcagataca
gataaaaaaaagcccctgaaggcgtttgttggtggcaatgactcagagacttgtgaggag
aggagccagagcagagagccccaagggaggggccgtgggattctgttccttcctgccaac
acggacctctctgccagcactgccggctcccccgaacccggtcaccccgggcccaggctc
ctgctgggcggtgctggcagtaaaggcccccgaagccggggccgaggcggcactgctcgc
aggctgtgggacccgaacaacccggaccaaaaacctgccctgaagagccaaactgctcag
cttcacttcctagacacggacgatgaagtgagccccacctcctggggggaagcccgccag
gcccaggcatcctactataaattccaaaactctgacaacccctactattaccctcgggct
gccggtcagggcccccagtatcctntannnnnnnnnnnnnnnnnnggtccaagcaacggt
gtgtatccaggagcctatttccccgggtaccccggccaggcagggcagtacctgtgcggc
cccctgcccccagctcccctgagtcctgagatggagcagcagatgcggaacatgcaacag
caggagctcagcaaactcctccgtgaggctgggaatcaggagcagcagctcagcaatctg
ctttccagagaccgcatcagcccggaggggctggagaagatggctcagctcagggtggag
atgctgcagctgtacgaacggtgcatcctgatggatattgaattctccgatacccagaac
gtggaccaactgctgtggaagaatgcgttttaccaggtgattgagaaattccggcagctt
ctcaaggatcctcaaggagaaaatgcccaagaaattcggaacaaactgctccagcttcta
gatgagggcacttctttttttgatgggctgctccagaagctgcaagtgtcataccagttc
aagctagaggactacatggacggcatggtcatccgcaccaaacctctgaggaaaatggtg
aagtacgcactgatcagtgctcagaggtgtatgatttgccaaggggacatttgccgatac
agagaacaagccaatgacaccgcaaactacggaaaggcccgcagctggtacctgaaggct
cagcaaattgctcccaaaaacggccgcccgtacaaccagctggcgcttctggccatctac
acgaggagaaagctggatgccgtctactattacatgcgcagtctggctgccagcaacccc
atcctcacggccaaggagagcctcatgagtctgttcgaagagacgaaacgcaaggctgag
cagatggagcagagaaaacatcaggtgctggatctgagccccagccgctgggggaagggc
aagaaacccacattgcgacaagttggagatgatgccacgcggctggagatctggatccat
ccttcacacccccgctcctcccagggccacgagtccggcagggattccgaacaggacaac
ggtcttgggaacctcagccccagcgacctgaacaaaaggttcatcctcagttttctccat
gcccatgggaagctgtttaccaggattgggatggagactttccctgcggtggccgaggag
gtcctgagggagttccaggtcctgctgcagcacagcccccctcccatcggaagcacccgc
atgctccagcttgtggccatcaacatgtttgcggtgtacaactcccagcccaaagagtgc
atctcggaggactgccgctccgtcatccaggaacaggccacggccctggggctctccatg
tttgccctcttggtgaggaggtgcaccagcctgctgcgggaatgcgcgcaagttcagcca
caagaggttgagcaggaggatgaggaagacgacatcaaggtctctgccttgccccaggac
ctaaaggagctgctccccagtgtaaaggtctggtcagactggatgctcggacacccggac
acctggaatcctcctccgacctctctggagctccccaaacaggtctcagtagatgtgtgg
gcgacgctggctgacttctgtaacatactgaccacagtgaatcagtcggaggtgcccttg
tacaaggacccagatgacgaccttgccctgcttagcctggaagaggatcggctgctctcg
ggcttcgttcccctgctggtcgccccccaggagccctgctacgtggagaggacctcggac
aaggttattgcagccgactgcaagagggtcacagttctgaagtatttcctggaagccctt
tgtggacaagaagagcctttgctggcattcaagggtggaaaatatgtgtcagtggcaccc
gtcccagacgccatgggaaaggaaatgggaagccaagagggaaaacaactggaagatcag
gaagatgatgtgaggattgaggcctatgaagatgattctgaggctgaaggcagcggagga
gagatggacatcaaggagctcagagccaagaaacaagccctggccaggaaagtcgctgag
cagcagcgtcgacaagacaagattcaggccgtgctgaaagaccagagtcaaatgaggcag
atggagctggagatcagacctgtcttcctggtcccagacactaatggtttcatcgaccac
ctcagtggtttgcggacactgctggactgcaggaaattcatcctggtggtgcccctgatc
gtgataaacgagctggatggcctggccaagggcccagagatggagcaccgcgccgcaggt
tatgcccgccaagtgcaggagagagccaggaagtccatcgagttcctggaagagcgattt
gagagccgagacaactgcttgagggctctgaccagccgaggcaacgagctggagtccatc
tccttccgcagcgaagacaccacgggccagcagggcaacaatgatgacctgattctgtcc
tgctgcctccactattgcaatgacaaggccaaggatttcatgcccaccaacaaagatgat
cccatccgtttgctcagggaagtggttttgctgacggatgaccggaacctacgagtcaaa
gcgttgactcgcaacgtgccggtgcgggacatccccaccttcctcaagtgggcccaggag
ggctga
DBGET
integrated database retrieval system
