Columba livia (rock pigeon): 102093948
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Entry
102093948 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,4-galactosyltransferase 3-like
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv00510
N-Glycan biosynthesis
clv00513
Various types of N-glycan biosynthesis
clv00514
Other types of O-glycan biosynthesis
clv00515
Mannose type O-glycan biosynthesis
clv00533
Glycosaminoglycan biosynthesis - keratan sulfate
clv00601
Glycosphingolipid biosynthesis - lacto and neolacto series
clv01100
Metabolic pathways
Module
clv_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
clv_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
102093948
00513 Various types of N-glycan biosynthesis
102093948
00515 Mannose type O-glycan biosynthesis
102093948
00514 Other types of O-glycan biosynthesis
102093948
00533 Glycosaminoglycan biosynthesis - keratan sulfate
102093948
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
102093948
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clv01003
]
102093948
Enzymes [BR:
clv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
102093948
2.4.1.90 N-acetyllactosamine synthase
102093948
Glycosyltransferases [BR:
clv01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
102093948
Glycolipid
102093948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
102093948
NCBI-ProteinID:
XP_013225509
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MSLSRVENPCFLLFLFVFQAIFILILYRGGPSNVFRGLLDSHQVLDYSKTHDVYTNLSLF
TQAPNEEAMPYCSAQSPIFVGPLTVTFRVLPSERMIIKKNPFVQAGGLYRPPHCLARYKS
AILVAYRNQEKYLRHLLYYIHPFLQRQQLSYSIYLIQQVGNGTFNRAKLLNVGVREAMKD
EDWDCLLLHDVDLVPENDYNLYVCDEYYPKHMSSAMDKFQYTLPYKSFFGGVSALTPEHY
MKMNGFPNTYWGGGGENDDIATRYXCTGQAXNRTPPHLGRYKVMDYNEETETQEPWRSPT
SRHNTRKTWKDDGMNSLEFKLLSRTKHPLYTNITVDIGYVPPFS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctcccgtgtcgaaaatccttgttttctgctctttctgttcgttttccaagca
atatttattctgatactctaccgaggcggaccttcaaatgtgtttcgtgggcttttagac
tcgcatcaggttctggattactcaaaaacccatgacgtgtatacaaacctcagcttgttc
acccaagctcctaatgaagaagccatgccatactgctcagcgcagtcaccaatatttgtt
ggtccattgactgttaccttcagagtgctccctagtgaaagaatgataataaaaaaaaat
ccctttgttcaggctggtggcctctacaggcccccccactgcttggcccgctacaaatca
gccatccttgtagcctacaggaaccaggagaagtaccttcgccatcttctctactatatt
catcctttcttgcagcgccagcagctcagctacagtatctacttgattcagcaggtgggg
aatggtacatttaaccgagcaaagctgctcaatgttggtgtccgggaagccatgaaggat
gaagactgggattgccttctcctgcacgacgtggacctagtgcctgaaaatgattataat
ctttatgtttgcgatgaatactatcccaagcatatgtctagtgccatggataagtttcag
tacactcttccatataagtccttttttggtggcgtatctgctctgactccagaacattac
atgaagatgaatgggtttccaaacacatactggggcggtggtggtgaaaatgatgacatt
gctacaaggtactaatgcacagggcaggcttaaaataggacaccacctcaccttggacgc
tacaaagtcatggactacaatgaagagacagagacacaagagccttggagaagtcctact
tcccgacacaacaccagaaaaacatggaaggatgacggaatgaattcactggagttcaag
ctcctttccaggacaaagcatcctctgtataccaacatcactgtggacataggctatgtt
cccccattttcttaa
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