Columba livia (rock pigeon): 102094505
Help
Entry
102094505 CDS
T02912
Symbol
SETDB1
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv00310
Lysine degradation
clv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102094505 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clv03036
]
102094505 (SETDB1)
Enzymes [BR:
clv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
102094505 (SETDB1)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102094505 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102094505 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Motif
Other DBs
NCBI-GeneID:
102094505
NCBI-ProteinID:
XP_013226017
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MDSEEMEEVMEEQDISMEELQEIIDKELEKFECVKQWKQQLEELEKCVKQKEEEVARVDR
LFDDTARDISRCELSVKDLYAKLGLQYRESSSEDEDSAAKAMEVIEIPDEDDDDVMSVDS
GWKHSDSNYRIPKNRTRLREAMAAMRKSTQDMQRFVDAVNKRMSAQDAQKDTQTPWEAPG
TVQPVGSDLSSDGDLSIGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKVKFDNKGKSLLS
GNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAEAPNVKNKDRFLIFFDDGYAS
YVKEWELYPVCRPLKKTWEDIEDVSCRDFVEEYITAYPNRPMVLLKSGQLIKTEWEGTWW
KSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNV
GAVRSKGPVVQYTQDLTGAGPQYKPLEQMQAASLPPRSASPQPADTECSDTQLAQARKQV
AKKSTSFRPSSVGSGQSSPASPVLSDAPSGRTSAAPQHRXAEPANSSCCGVYCRGNRVGP
PSPSAVPPEHGSSSRPPSPVRSGAAQPFHGMSDRVPNEPSYRAPLEKLFYLPHVCSYTCL
AHVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRINRKMGFHVLYKTPCGLSLRTMQEIER
YLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPFYYIADITKGREDVPLSCVNEIDNTPPP
QVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNS
GYQHKRLEECLPTGVYECNKRCQCNINMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDI
AKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDARCSSDSSGV
DIKDGEEENTGTEEPEESNEDSSDDNFCKDEDFGASSVWRSYATRRQTRGQRDNGLSETA
SKDSGLTRHANHEEAAGACKLPVSEESSKNKVASWLSSNNVADGFQDSDSAASFRAGEGG
ESKGGKAELPGEREKTPVPMAGDARGEARVLKKEEPDEPTKLSGLSELGRMYGYNPSPPK
LEGIXNPLGSVPVAGSWRRGGLLEEKSAGGERSRVPLPQDVLTLSSSTDSEGENGAAAAG
QAPGAANDSDDIQTISSGSGDEDEKRNPAPGAGERDAEPRGRRSLRPRSTRGFALKSTHG
IAVKPANLAAAEKGESAPVCRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQN
VFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaggagatggaggaggtgatggaggagcaggacatctccatggaggagctg
caggagatcatcgacaaggagctggagaagttcgagtgcgtgaagcagtggaagcagcag
ctggaggagctggagaagtgtgtgaagcagaaggaggaggaggtggcgcgtgtcgaccgg
ctcttcgatgacactgcgagagacatcagcaggtgcgagctgtcggtgaaggatctgtac
gccaagctgggcctgcagtaccgcgagagcagctccgaggacgaggactcggccgccaag
gccatggaggtgatcgagatcccggacgaggacgacgacgacgtcatgagcgtcgattcg
ggctggaaacatagcgacagtaattacagaatcccgaagaatcggactcggctgcgggaa
gccatggctgccatgagaaagtccacccaggacatgcagagattcgtggatgccgtcaac
aagagaatgagcgcccaggacgcgcagaaagacacacagaccccttgggaagctccgggc
accgtccagcccgtcgggagcgacctcagcagcgacggcgacctgagcatcggcatgagg
atcctgggcaagaagagaaccaagacgtggcacaagggaacgctcatcgccatccagacg
gtcggggccggcaagaagtacaaggtgaagtttgataacaaagggaagagtttgctgtct
ggcaaccacatcgcctacgactaccacccctcgccggagaagcactacgtgggcagccgc
gttgtggccaagtacaaggacgggaatcaggtgtggctgtacgccggaatcgtggccgaa
gcccccaacgtgaagaataaagacaggttcctcatcttcttcgacgacggctacgcgtcc
tacgtgaaggagtgggagctgtacccggtctgcaggccgctgaaaaagacctgggaggac
atcgaggacgtgtcgtgccgcgatttcgtggaggagtacatcacggcctaccccaaccgg
cccatggtgctgctcaagagcgggcagctcatcaaaaccgagtgggaagggacctggtgg
aagtccagggtggaggaggtggacggcagcctggtcaaaatcctcttcctggacgacaaa
cgctgcgagtggatttaccgcggctccacgcgcctcgagcccatgttcagcatgaaaacc
tccacggcctccacccaggagaagaaacagagcggacaagcgaggactcgccccaatgtc
ggcgccgtccgcagcaaagggcccgtcgtgcagtacacgcaggatctgacgggcgcaggt
ccgcagtacaaaccgctggagcagatgcaggcggcctcgctgccgccgcggagcgcgtcc
ccgcagcccgccgacacggagtgctccgacactcagctggcccaggcgaggaaacaggtg
gccaagaagagcacgtcgttccggcccagctccgtgggctcgggacagtcgtccccggcg
tcccccgtcctgagcgacgccccctcgggcaggaccagcgcggccccgcagcaccggtga
gcggagccggcgaactcgtcatgctgtggggtttattgtcggggaaacagggtgggtccc
ccaagcccctccgcggttcctcccgagcacggcagctcatcgcgtcccccgtccccggtc
cgcagcggcgcggcgcagccgttccacggcatgagcgaccgcgtccccaacgagccgtcg
taccgcgcgccgctggagaagctgttctacctgccccacgtctgcagctacacctgcctg
gcgcacgtgcggcccatccgcagcgaccagtaccgcagcaagaacccgctgctcatcccg
ctgctctacgacttccggcgcatgacggcgcgccggcgcatcaaccgcaagatgggtttc
cacgtgctctacaagacgccgtgcgggctgagcctgcggaccatgcaggagatcgagcgc
tacctcttcgagacggactgcgactttctgttcctggagatgttctgcctggacccgtac
gtgctggtcgaccgcaagttccagccttacaaaccgttctactacatcgcggacatcacc
aagggccgggaggacgtcccgctgtcctgcgtcaacgagatcgacaacacgccgccgccg
caggtggcctacagcaaggagcgcatccccggcaagggcgtctacatcaacaccagctgg
gagttcctggtgggctgcgactgcaaggacggctgcagggacaagtcgaaatgcgcctgt
caccagctgacggtccaggccaccggctgcaccccgggcgggcagatcaaccccaactcc
gggtaccagcacaagcggctggaggaatgtctccccacgggcgtttacgagtgcaacaag
cggtgccagtgcaacatcaacatgtgcaccaaccggctggtgcagcacgggctgcaggtc
cggctgcagctcttcaagacgcagaacaagggctggggcatccgctgcctcgacgacatc
gccaagggctccttcgtctgcatctacgcagggaaaatcctcacggacgacttcgctgac
aaagaggggctggagatgggcgacgagtatttcgccaacctggaccacatcgagagcgtg
gagaacttcaaggagggctacgagagcgacgccaggtgctcctcggacagcagcggcgtg
gacatcaaggacggggaggaggagaacacgggcacggaggagccggaggagtccaacgag
gacagctccgacgacaacttctgcaaggacgaggacttcggcgccagctcggtgtggcgc
agctacgccacgcgccgccagacccgcggccagagggacaacgggctgtcggaaacggcc
tccaaggactcggggctcacccggcacgcgaaccacgaggaggcggcgggcgcctgcaag
ctgccggtgtccgaggagagctccaagaacaaggtggcgtcgtggctgagctccaacaac
gtggccgacggcttccaggacagcgacagcgccgcctccttcagagcgggcgagggcggc
gagagcaagggcggcaaagcggagctgcccggggagagggagaaaacccccgttcccatg
gcgggcgacgcgcgcggggaggcgagggtattgaagaaagaggagcccgacgagccgacc
aagctgtccgggctgagcgagctgggcaggatgtacgggtacaaccccagcccccccaaa
ctggaggggatcncaaacccgctgggttctgtcccggtcgcgggttcctggagacggggg
ggtctcctggaagagaaaagcgctggtggggaacggagccgcgtcccgctcccgcaggac
gtgctgacgctgtccagcagcacggacagcgagggcgagaacggggccgcggcggccgga
caggcccccggcgccgccaacgacagcgacgacatccagaccatctcctcgggctccggg
gacgaggacgagaagaggaacccggcgcccggggcaggtgagcgggacgcggaaccgcgc
gggcgccgttcgctccgtcctcgttccacgcgcggcttcgcgctcaagtccacgcacggc
atcgccgtcaaacccgccaacctggcggcggccgagaagggggagagcgcgcccgtgtgc
cgcaccacgcgccagttctacgacggcgaggagtcgtgctacatcatcgacgccaagctg
gaggggaacctgggccgctacctcaaccacagctgcagccccaacctcttcgtgcagaac
gtgttcgtggacacgcacgacctgcgcttcccctgggtcgccttcttcgccagcaagagg
atccgcgcgggcaccgagctgacctgggactacaactacgaggtgggcagcgtggagggc
aaggagctgctgtgctgctgcggggccatcgagtgccgggggcggctgctctga
DBGET
integrated database retrieval system
